Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 AC027702.1-201ENST00000563810 1770 ntBASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.31■□□□□ 0.68
THUMPD1Q9NXG2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
THUMPD1Q9NXG2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AC245052.3-201ENST00000450182 901 ntBASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
THUMPD1Q9NXG2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 AC005837.3-201ENST00000612163 286 ntBASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 LINC02228-203ENST00000641970 1355 ntBASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.28■□□□□ 0.68
THUMPD1Q9NXG2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 MIR6084-201ENST00000622012 110 ntBASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THUMPD1Q9NXG2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.27■□□□□ 0.67
THUMPD1Q9NXG2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
THUMPD1Q9NXG2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
THUMPD1Q9NXG2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 AC020907.5-201ENST00000624372 1936 ntBASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms