Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 RARRES2P6-201ENST00000567333 442 ntBASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LIN7CQ9NUP9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 MIR935-201ENST00000401179 91 ntBASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 AC007225.1-201ENST00000566331 1836 ntBASIC17.03■□□□□ 0.32
LIN7CQ9NUP9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 AIRN-201ENST00000601203 4374 ntBASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
LIN7CQ9NUP9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIN7CQ9NUP9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 AC026271.2-201ENST00000428091 497 ntBASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 TERF1P2-201ENST00000583350 1212 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms