Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZCCHC3Q9NUD5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 AC097381.1-201ENST00000429019 1296 ntBASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 AC034268.1-201ENST00000441047 882 ntBASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 AC116050.2-201ENST00000612102 1779 ntBASIC19.29■□□□□ 0.68
ZCCHC3Q9NUD5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 AC027702.1-201ENST00000563810 1770 ntBASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC3Q9NUD5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 SLC7A5P1-201ENST00000568957 537 ntBASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 NTF6G-201ENST00000591094 616 ntBASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC3Q9NUD5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.27■□□□□ 0.67
ZCCHC3Q9NUD5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 RBM17P2-201ENST00000616397 1405 ntBASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.26■□□□□ 0.67
ZCCHC3Q9NUD5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms