Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 AL390961.4-201ENST00000623958 2535 ntBASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC10.66□□□□□ -0.7
CDC42SE1Q9NRR8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
CDC42SE1Q9NRR8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CDC42SE1Q9NRR8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE1Q9NRR8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms