Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.91■■□□□ 1.1
TLR9Q9NR96 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TLR9Q9NR96 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 RPS2P55-201ENST00000397318 883 ntBASIC21.9■■□□□ 1.1
TLR9Q9NR96 AC107956.1-201ENST00000494359 873 ntBASIC21.9■■□□□ 1.1
TLR9Q9NR96 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 MTDHP1-201ENST00000605323 784 ntBASIC21.9■■□□□ 1.1
TLR9Q9NR96 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TLR9Q9NR96 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TLR9Q9NR96 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.89■■□□□ 1.1
TLR9Q9NR96 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
TLR9Q9NR96 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TLR9Q9NR96 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 BX088651.1-201ENST00000540551 451 ntBASIC21.89■■□□□ 1.09
TLR9Q9NR96 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TLR9Q9NR96 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.89■■□□□ 1.09
TLR9Q9NR96 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.88■■□□□ 1.09
TLR9Q9NR96 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TLR9Q9NR96 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.88■■□□□ 1.09
TLR9Q9NR96 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
TLR9Q9NR96 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TLR9Q9NR96 AC124016.1-201ENST00000609552 612 ntBASIC21.88■■□□□ 1.09
TLR9Q9NR96 AL023875.1-201ENST00000640777 796 ntBASIC21.88■■□□□ 1.09
TLR9Q9NR96 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TLR9Q9NR96 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 KRT17P2-201ENST00000300992 1314 ntBASIC21.87■■□□□ 1.09
TLR9Q9NR96 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 AC239809.2-201ENST00000415381 517 ntBASIC21.87■■□□□ 1.09
TLR9Q9NR96 TSPY7P-201ENST00000431358 1114 ntBASIC21.87■■□□□ 1.09
TLR9Q9NR96 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 AC133681.1-201ENST00000465482 601 ntBASIC21.87■■□□□ 1.09
TLR9Q9NR96 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TLR9Q9NR96 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.87■■□□□ 1.09
TLR9Q9NR96 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms