Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 AC022517.1-201ENST00000592429 346 ntBASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 AC073130.3-201ENST00000624389 2278 ntBASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEUROD4Q9HD90 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 AC027702.1-201ENST00000563810 1770 ntBASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 AC116050.2-201ENST00000612102 1779 ntBASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NEUROD4Q9HD90 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 AC004854.2-201ENST00000608450 1441 ntBASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 SLC7A5P2-201ENST00000553010 536 ntBASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 SLC7A5P1-201ENST00000568957 537 ntBASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 AC243732.1-201ENST00000612648 864 ntBASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 AC020907.5-201ENST00000624372 1936 ntBASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.35■□□□□ 0.69
NEUROD4Q9HD90 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 AC092667.1-201ENST00000434301 2586 ntBASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 KRT19P1-201ENST00000405746 1186 ntBASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 IKBKGP1-201ENST00000612193 1073 ntBASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.34■□□□□ 0.69
NEUROD4Q9HD90 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms