Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 AC097658.1-201ENST00000475555 843 ntBASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
POLR1BQ9H9Y6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
POLR1BQ9H9Y6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 AC120498.10-201ENST00000621827 505 ntBASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1BQ9H9Y6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 ESRRAP1-201ENST00000400596 1257 ntBASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 AC083880.1-201ENST00000608266 535 ntBASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 AC010542.4-201ENST00000563151 1910 ntBASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
POLR1BQ9H9Y6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 AC098590.1-201ENST00000468126 897 ntBASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1BQ9H9Y6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 GCSHP5-201ENST00000443090 522 ntBASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 MYC-209ENST00000641252 345 ntBASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR1BQ9H9Y6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms