Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
SOX17Q9H6I2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SOX17Q9H6I2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SOX17Q9H6I2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX17Q9H6I2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 AC007322.1-201ENST00000426983 750 ntBASIC19.88■□□□□ 0.77
SOX17Q9H6I2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.88■□□□□ 0.77
SOX17Q9H6I2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.88■□□□□ 0.77
SOX17Q9H6I2 AC231657.2-201ENST00000624556 255 ntBASIC19.88■□□□□ 0.77
SOX17Q9H6I2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SOX17Q9H6I2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 AC008175.2-201ENST00000612840 297 ntBASIC19.87■□□□□ 0.77
SOX17Q9H6I2 AC010536.3-201ENST00000620306 533 ntBASIC19.87■□□□□ 0.77
SOX17Q9H6I2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.87■□□□□ 0.77
SOX17Q9H6I2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SOX17Q9H6I2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SOX17Q9H6I2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX17Q9H6I2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms