Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPBQ9H078 AC098934.4-201ENST00000564127 592 ntBASIC20.65■□□□□ 0.9
CLPBQ9H078 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
CLPBQ9H078 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLPBQ9H078 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CLPBQ9H078 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.64■□□□□ 0.9
CLPBQ9H078 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLPBQ9H078 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLPBQ9H078 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 AC069152.1-201ENST00000438030 544 ntBASIC20.64■□□□□ 0.89
CLPBQ9H078 CD99P1-205ENST00000527459 561 ntBASIC20.64■□□□□ 0.89
CLPBQ9H078 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
CLPBQ9H078 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLPBQ9H078 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.63■□□□□ 0.89
CLPBQ9H078 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.63■□□□□ 0.89
CLPBQ9H078 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.63■□□□□ 0.89
CLPBQ9H078 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.63■□□□□ 0.89
CLPBQ9H078 KRT18P6-201ENST00000555540 1265 ntBASIC20.63■□□□□ 0.89
CLPBQ9H078 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.63■□□□□ 0.89
CLPBQ9H078 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.63■□□□□ 0.89
CLPBQ9H078 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.63■□□□□ 0.89
CLPBQ9H078 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.63■□□□□ 0.89
CLPBQ9H078 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLPBQ9H078 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLPBQ9H078 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CLPBQ9H078 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CLPBQ9H078 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.62■□□□□ 0.89
CLPBQ9H078 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
CLPBQ9H078 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.62■□□□□ 0.89
CLPBQ9H078 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLPBQ9H078 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLPBQ9H078 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLPBQ9H078 RBM17P2-201ENST00000616397 1405 ntBASIC20.61■□□□□ 0.89
CLPBQ9H078 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLPBQ9H078 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLPBQ9H078 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.61■□□□□ 0.89
CLPBQ9H078 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 AC245052.3-201ENST00000450182 901 ntBASIC20.61■□□□□ 0.89
CLPBQ9H078 AC093787.1-201ENST00000450396 207 ntBASIC20.61■□□□□ 0.89
CLPBQ9H078 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.61■□□□□ 0.89
CLPBQ9H078 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLPBQ9H078 AC133041.1-202ENST00000642053 222 ntBASIC20.61■□□□□ 0.89
CLPBQ9H078 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLPBQ9H078 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
CLPBQ9H078 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.61■□□□□ 0.89
CLPBQ9H078 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
CLPBQ9H078 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLPBQ9H078 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
CLPBQ9H078 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.6■□□□□ 0.89
CLPBQ9H078 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLPBQ9H078 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLPBQ9H078 AC073210.2-201ENST00000430369 194 ntBASIC20.6■□□□□ 0.89
CLPBQ9H078 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.6■□□□□ 0.89
CLPBQ9H078 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLPBQ9H078 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.6■□□□□ 0.89
CLPBQ9H078 AC016405.3-201ENST00000607710 860 ntBASIC20.6■□□□□ 0.89
CLPBQ9H078 OR10C1-204ENST00000622521 1039 ntBASIC20.6■□□□□ 0.89
CLPBQ9H078 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.6■□□□□ 0.89
CLPBQ9H078 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLPBQ9H078 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLPBQ9H078 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 MKRN4P-201ENST00000444706 1521 ntBASIC20.59■□□□□ 0.89
CLPBQ9H078 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLPBQ9H078 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms