Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AC024257.2-201ENST00000549699 147 ntBASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AL136162.1-201ENST00000607711 1078 ntBASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AC105233.4-201ENST00000642045 216 ntBASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AC005224.4-201ENST00000583262 1652 ntBASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AC027702.1-201ENST00000563810 1770 ntBASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMSS1Q9BQ75 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 AC026471.1-201ENST00000564629 3026 ntBASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
CMSS1Q9BQ75 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 AC020907.5-201ENST00000624372 1936 ntBASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
CMSS1Q9BQ75 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 AC135279.3-201ENST00000610945 1311 ntBASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 AC008764.7-201ENST00000593779 1081 ntBASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 AC138932.1-201ENST00000534164 6830 ntBASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms