Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LITAFQ99732 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LITAFQ99732 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.72□□□□□ -0.21
LITAFQ99732 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LITAFQ99732 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.71□□□□□ -0.21
LITAFQ99732 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LITAFQ99732 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.71□□□□□ -0.21
LITAFQ99732 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
LITAFQ99732 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.71□□□□□ -0.22
LITAFQ99732 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LITAFQ99732 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LITAFQ99732 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LITAFQ99732 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.7□□□□□ -0.22
LITAFQ99732 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LITAFQ99732 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.7□□□□□ -0.22
LITAFQ99732 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LITAFQ99732 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.69□□□□□ -0.22
LITAFQ99732 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.69□□□□□ -0.22
LITAFQ99732 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LITAFQ99732 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.69□□□□□ -0.22
LITAFQ99732 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.69□□□□□ -0.22
LITAFQ99732 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LITAFQ99732 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.69□□□□□ -0.22
LITAFQ99732 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 BX005040.4-201ENST00000637145 1518 ntBASIC13.69□□□□□ -0.22
LITAFQ99732 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LITAFQ99732 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 AC011484.1-201ENST00000377652 1995 ntBASIC13.69□□□□□ -0.22
LITAFQ99732 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LITAFQ99732 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.69□□□□□ -0.22
LITAFQ99732 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.69□□□□□ -0.22
LITAFQ99732 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.69□□□□□ -0.22
LITAFQ99732 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LITAFQ99732 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.68□□□□□ -0.22
LITAFQ99732 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.68□□□□□ -0.22
LITAFQ99732 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.68□□□□□ -0.22
LITAFQ99732 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.68□□□□□ -0.22
LITAFQ99732 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.68□□□□□ -0.22
LITAFQ99732 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LITAFQ99732 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms