Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 AC026471.1-201ENST00000564629 3026 ntBASIC18.65■□□□□ 0.58
SNX18Q96RF0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNX18Q96RF0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX18Q96RF0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX18Q96RF0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX18Q96RF0 AL162430.1-201ENST00000480705 870 ntBASIC18.64■□□□□ 0.57
SNX18Q96RF0 TPRG1LP1-201ENST00000598702 760 ntBASIC18.64■□□□□ 0.57
SNX18Q96RF0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX18Q96RF0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX18Q96RF0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 LETM1P2-201ENST00000597330 2178 ntBASIC18.64■□□□□ 0.57
SNX18Q96RF0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX18Q96RF0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX18Q96RF0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 AL358852.1-201ENST00000623174 1268 ntBASIC18.63■□□□□ 0.57
SNX18Q96RF0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX18Q96RF0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX18Q96RF0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 AC006128.1-201ENST00000624704 1661 ntBASIC18.62■□□□□ 0.57
SNX18Q96RF0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNX18Q96RF0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX18Q96RF0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX18Q96RF0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX18Q96RF0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms