Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH15Q96QU1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 RCN1P1-201ENST00000400413 996 ntBASIC20.2■□□□□ 0.82
PCDH15Q96QU1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 AC113410.3-201ENST00000623366 203 ntBASIC20.2■□□□□ 0.82
PCDH15Q96QU1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH15Q96QU1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 AL023875.1-201ENST00000640777 796 ntBASIC20.19■□□□□ 0.82
PCDH15Q96QU1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH15Q96QU1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 MIR4785-201ENST00000585005 73 ntBASIC20.18■□□□□ 0.82
PCDH15Q96QU1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH15Q96QU1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 KRT17P2-201ENST00000300992 1314 ntBASIC20.17■□□□□ 0.82
PCDH15Q96QU1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH15Q96QU1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms