Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.53■□□□□ 0.4
SPG11Q96JI7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPG11Q96JI7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 AC145285.6-201ENST00000604632 637 ntBASIC17.52■□□□□ 0.4
SPG11Q96JI7 AC105020.6-201ENST00000621523 1217 ntBASIC17.52■□□□□ 0.4
SPG11Q96JI7 AC113410.3-201ENST00000623366 203 ntBASIC17.52■□□□□ 0.4
SPG11Q96JI7 KRT8P9-201ENST00000558927 1449 ntBASIC17.52■□□□□ 0.4
SPG11Q96JI7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPG11Q96JI7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPG11Q96JI7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPG11Q96JI7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPG11Q96JI7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.52■□□□□ 0.4
SPG11Q96JI7 NTF6B-201ENST00000591913 560 ntBASIC17.52■□□□□ 0.4
SPG11Q96JI7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.52■□□□□ 0.39
SPG11Q96JI7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SPG11Q96JI7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.52■□□□□ 0.39
SPG11Q96JI7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.52■□□□□ 0.39
SPG11Q96JI7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPG11Q96JI7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.51■□□□□ 0.39
SPG11Q96JI7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPG11Q96JI7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.5■□□□□ 0.39
SPG11Q96JI7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPG11Q96JI7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.5■□□□□ 0.39
SPG11Q96JI7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 AC113347.1-201ENST00000413321 391 ntBASIC17.49■□□□□ 0.39
SPG11Q96JI7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 KRT18P57-201ENST00000443599 1254 ntBASIC17.49■□□□□ 0.39
SPG11Q96JI7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 AC110285.5-201ENST00000611501 352 ntBASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.49■□□□□ 0.39
SPG11Q96JI7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPG11Q96JI7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPG11Q96JI7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPG11Q96JI7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms