Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITCHQ96J02 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITCHQ96J02 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITCHQ96J02 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ITCHQ96J02 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITCHQ96J02 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.55■□□□□ 0.72
ITCHQ96J02 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 POU5F1P4-201ENST00000413175 1085 ntBASIC19.55■□□□□ 0.72
ITCHQ96J02 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.55■□□□□ 0.72
ITCHQ96J02 AC008175.2-201ENST00000612840 297 ntBASIC19.55■□□□□ 0.72
ITCHQ96J02 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
ITCHQ96J02 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ITCHQ96J02 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ITCHQ96J02 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ITCHQ96J02 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.54■□□□□ 0.72
ITCHQ96J02 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.54■□□□□ 0.72
ITCHQ96J02 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 TPRG1LP1-201ENST00000598702 760 ntBASIC19.54■□□□□ 0.72
ITCHQ96J02 AL354811.1-201ENST00000610286 706 ntBASIC19.54■□□□□ 0.72
ITCHQ96J02 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.54■□□□□ 0.72
ITCHQ96J02 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 AL162377.1-201ENST00000618844 1793 ntBASIC19.54■□□□□ 0.72
ITCHQ96J02 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.54■□□□□ 0.72
ITCHQ96J02 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 AC007952.6-201ENST00000573168 2673 ntBASIC19.54■□□□□ 0.72
ITCHQ96J02 AC003957.1-201ENST00000625108 2673 ntBASIC19.54■□□□□ 0.72
ITCHQ96J02 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ITCHQ96J02 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITCHQ96J02 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.54■□□□□ 0.72
ITCHQ96J02 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.53■□□□□ 0.72
ITCHQ96J02 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.53■□□□□ 0.72
ITCHQ96J02 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.53■□□□□ 0.72
ITCHQ96J02 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.53■□□□□ 0.72
ITCHQ96J02 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.53■□□□□ 0.72
ITCHQ96J02 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.53■□□□□ 0.72
ITCHQ96J02 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.53■□□□□ 0.72
ITCHQ96J02 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ITCHQ96J02 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 AL136967.2-201ENST00000623968 743 ntBASIC19.53■□□□□ 0.72
ITCHQ96J02 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ITCHQ96J02 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ITCHQ96J02 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITCHQ96J02 AL512408.1-201ENST00000569378 2000 ntBASIC19.52■□□□□ 0.72
ITCHQ96J02 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ITCHQ96J02 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ITCHQ96J02 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.52■□□□□ 0.72
ITCHQ96J02 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 AC110285.6-201ENST00000617652 491 ntBASIC19.52■□□□□ 0.72
ITCHQ96J02 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
ITCHQ96J02 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITCHQ96J02 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.52■□□□□ 0.72
ITCHQ96J02 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ITCHQ96J02 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ITCHQ96J02 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
ITCHQ96J02 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms