Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NPIPB3Q92617 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPB3Q92617 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPB3Q92617 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NPIPB3Q92617 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPB3Q92617 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPB3Q92617 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPB3Q92617 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPB3Q92617 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPB3Q92617 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 AC012414.1-201ENST00000556676 535 ntBASIC16.19■□□□□ 0.18
NPIPB3Q92617 AC110285.6-201ENST00000617652 491 ntBASIC16.19■□□□□ 0.18
NPIPB3Q92617 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 AL136967.2-201ENST00000623968 743 ntBASIC16.19■□□□□ 0.18
NPIPB3Q92617 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
NPIPB3Q92617 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPIPB3Q92617 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NPIPB3Q92617 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPIPB3Q92617 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPB3Q92617 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 AC008175.2-201ENST00000612840 297 ntBASIC16.17■□□□□ 0.18
NPIPB3Q92617 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPB3Q92617 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPB3Q92617 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NPIPB3Q92617 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms