Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC008550.1-201ENST00000511500 884 ntBASIC32.24■■■□□ 2.75
CASKIN1Q8WXD9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CASKIN1Q8WXD9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC32.24■■■□□ 2.75
CASKIN1Q8WXD9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CASKIN1Q8WXD9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 RN7SL471P-201ENST00000580476 299 ntBASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC32.23■■■□□ 2.75
CASKIN1Q8WXD9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC32.22■■■□□ 2.75
CASKIN1Q8WXD9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 KRT17P3-201ENST00000420566 1262 ntBASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 UBE2SP1-201ENST00000450587 669 ntBASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC32.21■■■□□ 2.75
CASKIN1Q8WXD9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 AC244015.2-201ENST00000616358 1861 ntBASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 C1QBPP2-201ENST00000528754 825 ntBASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
CASKIN1Q8WXD9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC32.2■■■□□ 2.74
CASKIN1Q8WXD9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 RPS2P4-201ENST00000476944 856 ntBASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 MME-217ENST00000616757 1315 ntTSL 5 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CASKIN1Q8WXD9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CASKIN1Q8WXD9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 AC005829.2-201ENST00000571422 1056 ntBASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CASKIN1Q8WXD9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms