Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MBD3L1Q8WWY6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
MBD3L1Q8WWY6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 LETM1P2-201ENST00000597330 2178 ntBASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 AC011484.1-201ENST00000377652 1995 ntBASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MBD3L1Q8WWY6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 OR2I1P-207ENST00000453522 948 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 pRNA.6-201ENST00000610482 90 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 pRNA.5-201ENST00000612139 90 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 pRNA.11-201ENST00000618423 90 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 pRNA.13-201ENST00000619112 90 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 AC026471.1-201ENST00000564629 3026 ntBASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.1■□□□□ 0.17
MBD3L1Q8WWY6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MBD3L1Q8WWY6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms