Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CT55Q8WUE5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CT55Q8WUE5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.25■□□□□ 0.67
CT55Q8WUE5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.24■□□□□ 0.67
CT55Q8WUE5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 PGM5P4-201ENST00000421970 445 ntBASIC19.24■□□□□ 0.67
CT55Q8WUE5 POM121L13P-201ENST00000422362 380 ntBASIC19.24■□□□□ 0.67
CT55Q8WUE5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.24■□□□□ 0.67
CT55Q8WUE5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CT55Q8WUE5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CT55Q8WUE5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CT55Q8WUE5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.23■□□□□ 0.67
CT55Q8WUE5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CT55Q8WUE5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CT55Q8WUE5 ECEL1P1-201ENST00000373592 1742 ntBASIC19.22■□□□□ 0.67
CT55Q8WUE5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CT55Q8WUE5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
CT55Q8WUE5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 AL356652.1-201ENST00000615962 565 ntBASIC19.21■□□□□ 0.67
CT55Q8WUE5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
CT55Q8WUE5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CT55Q8WUE5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 MIR718-201ENST00000390190 70 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms