Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 AC034268.1-201ENST00000441047 882 ntBASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 KRT18P14-201ENST00000534205 1250 ntBASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCHCR1Q8TD31 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 AC087623.3-201ENST00000607047 1098 ntBASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 MIR5787-201ENST00000611784 55 ntBASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCHCR1Q8TD31 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 AC079140.4-201ENST00000507448 529 ntBASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCHCR1Q8TD31 AC020907.5-201ENST00000624372 1936 ntBASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 AC027702.1-201ENST00000563810 1770 ntBASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.35■■□□□ 1.01
CCHCR1Q8TD31 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CCHCR1Q8TD31 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCHCR1Q8TD31 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CCHCR1Q8TD31 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCHCR1Q8TD31 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCHCR1Q8TD31 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCHCR1Q8TD31 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 AC053503.5-201ENST00000601508 636 ntBASIC21.32■■□□□ 1
CCHCR1Q8TD31 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCHCR1Q8TD31 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCHCR1Q8TD31 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CCHCR1Q8TD31 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms