Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 AC018445.3-201ENST00000624177 1945 ntBASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 AC131281.2-201ENST00000520478 145 ntBASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 MIR4466-201ENST00000606121 54 ntBASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
RFWD2Q8NHY2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD2Q8NHY2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD2Q8NHY2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RFWD2Q8NHY2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD2Q8NHY2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RFWD2Q8NHY2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD2Q8NHY2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 BX005040.4-201ENST00000637145 1518 ntBASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD2Q8NHY2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms