Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SPTSSBQ8NFR3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 AL356309.3-201ENST00000624132 1934 ntBASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 AC080038.3-201ENST00000623346 1952 ntBASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.3□□□□□ -0.6
SPTSSBQ8NFR3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 AC008813.1-201ENST00000536597 885 ntBASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CAHM-201ENST00000604200 896 ntBASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SPTSSBQ8NFR3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms