Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 CNN2P6-201ENST00000439038 900 ntBASIC17.98■□□□□ 0.47
CPEB3Q8NE35 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 AC013268.1-206ENST00000638368 961 ntBASIC17.98■□□□□ 0.47
CPEB3Q8NE35 AC112229.1-201ENST00000639295 961 ntBASIC17.98■□□□□ 0.47
CPEB3Q8NE35 AC116050.2-201ENST00000612102 1779 ntBASIC17.98■□□□□ 0.47
CPEB3Q8NE35 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPEB3Q8NE35 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 AC006128.1-201ENST00000624704 1661 ntBASIC17.97■□□□□ 0.47
CPEB3Q8NE35 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPEB3Q8NE35 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 AC080038.1-201ENST00000611274 1154 ntBASIC17.96■□□□□ 0.47
CPEB3Q8NE35 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.96■□□□□ 0.47
CPEB3Q8NE35 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPEB3Q8NE35 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 AC007322.4-201ENST00000509611 723 ntBASIC17.95■□□□□ 0.46
CPEB3Q8NE35 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 AL591742.1-201ENST00000604433 565 ntBASIC17.95■□□□□ 0.46
CPEB3Q8NE35 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPEB3Q8NE35 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPEB3Q8NE35 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms