Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 AC092667.1-201ENST00000434301 2586 ntBASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM116Q8NCL8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM116Q8NCL8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 AC011484.1-201ENST00000377652 1995 ntBASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM116Q8NCL8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 TPRG1LP1-201ENST00000598702 760 ntBASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM116Q8NCL8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM116Q8NCL8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
TMEM116Q8NCL8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
TMEM116Q8NCL8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 MIR6084-201ENST00000622012 110 ntBASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM116Q8NCL8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM116Q8NCL8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM116Q8NCL8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TMEM116Q8NCL8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms