Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 AC242852.2-201ENST00000615738 1807 ntBASIC20.97■□□□□ 0.95
SYNPOQ8N3V7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SYNPOQ8N3V7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.95■□□□□ 0.95
SYNPOQ8N3V7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
SYNPOQ8N3V7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 SNORA78-201ENST00000459373 127 ntBASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 AC233263.1-201ENST00000578059 224 ntBASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 REXO1L12P-201ENST00000622156 912 ntBASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.95■□□□□ 0.94
SYNPOQ8N3V7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 AC012618.2-201ENST00000428058 849 ntBASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNPOQ8N3V7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms