Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC30.85■■■□□ 2.53
ABCA6Q8N139 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC30.85■■■□□ 2.53
ABCA6Q8N139 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC30.85■■■□□ 2.53
ABCA6Q8N139 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.85■■■□□ 2.53
ABCA6Q8N139 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ABCA6Q8N139 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC30.85■■■□□ 2.53
ABCA6Q8N139 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 P4HB-223ENST00000576390 439 ntTSL 4 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 AC006557.6-201ENST00000623071 864 ntBASIC30.84■■■□□ 2.53
ABCA6Q8N139 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
ABCA6Q8N139 AP003071.4-201ENST00000562276 1284 ntBASIC30.84■■■□□ 2.53
ABCA6Q8N139 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ABCA6Q8N139 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
ABCA6Q8N139 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC30.83■■■□□ 2.53
ABCA6Q8N139 Six3os1_6.1-201ENST00000620790 196 ntBASIC30.83■■■□□ 2.53
ABCA6Q8N139 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.83■■■□□ 2.53
ABCA6Q8N139 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC30.83■■■□□ 2.53
ABCA6Q8N139 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ABCA6Q8N139 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
ABCA6Q8N139 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ABCA6Q8N139 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
ABCA6Q8N139 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.82■■■□□ 2.52
ABCA6Q8N139 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCA6Q8N139 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCA6Q8N139 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCA6Q8N139 KRT8P9-201ENST00000558927 1449 ntBASIC30.81■■■□□ 2.52
ABCA6Q8N139 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.81■■■□□ 2.52
ABCA6Q8N139 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.81■■■□□ 2.52
ABCA6Q8N139 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC30.81■■■□□ 2.52
ABCA6Q8N139 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC30.81■■■□□ 2.52
ABCA6Q8N139 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCA6Q8N139 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC30.81■■■□□ 2.52
ABCA6Q8N139 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ABCA6Q8N139 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
ABCA6Q8N139 FAM99A-202ENST00000538190 1989 ntBASIC30.8■■■□□ 2.52
ABCA6Q8N139 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
ABCA6Q8N139 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
ABCA6Q8N139 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC30.8■■■□□ 2.52
ABCA6Q8N139 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ABCA6Q8N139 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC30.8■■■□□ 2.52
ABCA6Q8N139 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
ABCA6Q8N139 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
ABCA6Q8N139 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ABCA6Q8N139 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ABCA6Q8N139 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 AL356652.1-201ENST00000615962 565 ntBASIC30.79■■■□□ 2.52
ABCA6Q8N139 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
ABCA6Q8N139 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
ABCA6Q8N139 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC30.78■■■□□ 2.52
ABCA6Q8N139 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC30.78■■■□□ 2.52
ABCA6Q8N139 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.78■■■□□ 2.52
ABCA6Q8N139 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.78■■■□□ 2.52
ABCA6Q8N139 AC092865.7-201ENST00000641832 219 ntBASIC30.78■■■□□ 2.52
ABCA6Q8N139 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ABCA6Q8N139 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC30.78■■■□□ 2.52
ABCA6Q8N139 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms