Protein–RNA interactions for Protein: Q8IYA6

CKAP2L, Cytoskeleton-associated protein 2-like, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2LQ8IYA6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 AC073314.1-201ENST00000568729 2216 ntBASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2LQ8IYA6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
CKAP2LQ8IYA6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 AC011767.1-201ENST00000617410 1153 ntBASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 AC073111.5-205ENST00000641717 521 ntBASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CKAP2LQ8IYA6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 UBE2DNL-204ENST00000602536 740 ntBASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2LQ8IYA6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 AC006128.1-201ENST00000624704 1661 ntBASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 AC138907.5-202ENST00000569484 235 ntBASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CKAP2LQ8IYA6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 AP005212.1-201ENST00000581547 1997 ntBASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 CDCA4P2-201ENST00000441182 718 ntBASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 AC010141.2-201ENST00000452426 721 ntBASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2LQ8IYA6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 AC053503.5-201ENST00000601508 636 ntBASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CKAP2LQ8IYA6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms