Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD2Q8IV50 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 AC103724.3-201ENST00000564481 992 ntBASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 AL049812.1-201ENST00000432563 2267 ntBASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD2Q8IV50 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 AL499627.2-201ENST00000606283 725 ntBASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 OR7E47P-201ENST00000546390 1422 ntBASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD2Q8IV50 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 TSPY13P-201ENST00000338964 914 ntBASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 AC021242.3-201ENST00000607598 1377 ntBASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD2Q8IV50 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.02■□□□□ 0.48
LYSMD2Q8IV50 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.02■□□□□ 0.47
LYSMD2Q8IV50 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD2Q8IV50 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD2Q8IV50 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD2Q8IV50 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
LYSMD2Q8IV50 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.01■□□□□ 0.47
LYSMD2Q8IV50 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD2Q8IV50 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms