Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.52■□□□□ 0.4
CSMD2Q7Z408 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 AC006557.6-201ENST00000623071 864 ntBASIC17.52■□□□□ 0.4
CSMD2Q7Z408 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.52■□□□□ 0.4
CSMD2Q7Z408 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 NUDT16P1-203ENST00000513809 620 ntBASIC17.52■□□□□ 0.39
CSMD2Q7Z408 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD2Q7Z408 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 AC006011.2-201ENST00000621313 1158 ntBASIC17.51■□□□□ 0.39
CSMD2Q7Z408 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 KRT18P56-201ENST00000507275 550 ntBASIC17.51■□□□□ 0.39
CSMD2Q7Z408 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD2Q7Z408 AC005829.2-201ENST00000571422 1056 ntBASIC17.51■□□□□ 0.39
CSMD2Q7Z408 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 AC120498.8-201ENST00000614275 531 ntBASIC17.5■□□□□ 0.39
CSMD2Q7Z408 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 AC124283.5-201ENST00000624661 1809 ntBASIC17.5■□□□□ 0.39
CSMD2Q7Z408 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 AC010542.4-201ENST00000563151 1910 ntBASIC17.5■□□□□ 0.39
CSMD2Q7Z408 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD2Q7Z408 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 KRASP1-201ENST00000407852 552 ntBASIC17.49■□□□□ 0.39
CSMD2Q7Z408 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 AC010947.1-201ENST00000623454 693 ntBASIC17.49■□□□□ 0.39
CSMD2Q7Z408 AC079598.2-202ENST00000546624 1451 ntBASIC17.49■□□□□ 0.39
CSMD2Q7Z408 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 KRT126P-201ENST00000549467 1181 ntBASIC17.49■□□□□ 0.39
CSMD2Q7Z408 WWOX-216ENST00000569818 525 ntBASIC17.49■□□□□ 0.39
CSMD2Q7Z408 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD2Q7Z408 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 KRT18P22-201ENST00000402024 1347 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 KRT18P68-201ENST00000392293 1000 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 AC026396.1-201ENST00000419388 421 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 AC009947.2-201ENST00000444014 672 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 RBM17P1-201ENST00000453646 1190 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 AP000525.1-201ENST00000608286 694 ntBASIC17.48■□□□□ 0.39
CSMD2Q7Z408 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms