Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 SLC7A5P1-201ENST00000568957 537 ntBASIC18.91■□□□□ 0.62
ZNF550Q7Z398 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 LINC01521-201ENST00000504184 1943 ntBASIC18.91■□□□□ 0.62
ZNF550Q7Z398 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF550Q7Z398 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF550Q7Z398 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.62
ZNF550Q7Z398 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
ZNF550Q7Z398 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF550Q7Z398 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 AC006015.1-201ENST00000429970 570 ntBASIC18.89■□□□□ 0.61
ZNF550Q7Z398 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 AC080038.1-201ENST00000611274 1154 ntBASIC18.89■□□□□ 0.61
ZNF550Q7Z398 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNF550Q7Z398 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 AC116050.2-201ENST00000612102 1779 ntBASIC18.88■□□□□ 0.61
ZNF550Q7Z398 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZNF550Q7Z398 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF550Q7Z398 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms