Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SUN1-229ENST00000475971 4038 ntTSL 1 (best)9.4□□□□□ -0.91e-6■■■□□ 17.2
SND1Q7KZF4 ILVBL-207ENST00000533148 1309 ntTSL 517.98■□□□□ 0.471e-7■■■□□ 17.2
SND1Q7KZF4 ILVBL-212ENST00000598709 747 ntTSL 515.51■□□□□ 0.079e-8■■■□□ 17.2
SND1Q7KZF4 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 520.79■□□□□ 0.921e-8■■■□□ 17.2
SND1Q7KZF4 ERO1A-209ENST00000556769 934 ntTSL 58.64□□□□□ -1.033e-6■■■□□ 17.2
SND1Q7KZF4 HSD17B12-208ENST00000533090 2507 ntTSL 26.47□□□□□ -1.378e-8■■■□□ 17.2
SND1Q7KZF4 HP-208ENST00000564499 695 ntTSL 39.31□□□□□ -0.926e-11■■■□□ 17.2
SND1Q7KZF4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.762e-6■■■□□ 17.2
SND1Q7KZF4 CRELD2-209ENST00000483652 1994 ntTSL 1 (best)21.5■■□□□ 1.032e-6■■■□□ 17.2
SND1Q7KZF4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.632e-6■■■□□ 17.2
SND1Q7KZF4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.62e-6■■■□□ 17.2
SND1Q7KZF4 CRELD2-208ENST00000482956 855 ntTSL 1 (best)18.48■□□□□ 0.552e-6■■■□□ 17.2
SND1Q7KZF4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.33■□□□□ 0.522e-6■■■□□ 17.2
SND1Q7KZF4 EIF3D-204ENST00000426531 710 ntTSL 210.09□□□□□ -0.792e-6■■■□□ 17.2
SND1Q7KZF4 TBL2-221ENST00000496056 579 ntTSL 226.65■■□□□ 1.864e-8■■■□□ 17.2
SND1Q7KZF4 TBL2-216ENST00000469518 583 ntTSL 410.6□□□□□ -0.714e-8■■■□□ 17.2
SND1Q7KZF4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.877e-7■■■□□ 17.2
SND1Q7KZF4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.975e-9■■■□□ 17.2
SND1Q7KZF4 VCP-206ENST00000480327 884 ntTSL 59.38□□□□□ -0.912e-7■■■□□ 17.1
SND1Q7KZF4 SEZ6L2-208ENST00000568407 1068 ntTSL 316.31■□□□□ 0.22e-10■■■□□ 17.1
SND1Q7KZF4 SLC3A2-210ENST00000537839 584 ntTSL 510.79□□□□□ -0.688e-15■■■□□ 17.1
SND1Q7KZF4 POLR2G-208ENST00000533442 388 ntTSL 38.62□□□□□ -1.033e-12■■■□□ 17.1
SND1Q7KZF4 PRCP-217ENST00000534396 737 ntTSL 513.92□□□□□ -0.183e-7■■■□□ 17.1
SND1Q7KZF4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.99■□□□□ 0.796e-11■■■□□ 17.1
SND1Q7KZF4 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC13.67□□□□□ -0.226e-11■■■□□ 17.1
SND1Q7KZF4 DERL1-204ENST00000519018 575 ntTSL 4 BASIC13.33□□□□□ -0.286e-11■■■□□ 17.1
SND1Q7KZF4 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.36e-11■■■□□ 17.1
SND1Q7KZF4 DERL1-206ENST00000524119 5513 ntTSL 411.82□□□□□ -0.526e-11■■■□□ 17.1
SND1Q7KZF4 DERL1-205ENST00000523036 542 ntTSL 4 BASIC10.58□□□□□ -0.726e-11■■■□□ 17.1
SND1Q7KZF4 SLC11A2-226ENST00000551231 559 ntTSL 37.59□□□□□ -1.192e-7■■■□□ 17.1
SND1Q7KZF4 MYL12A-205ENST00000578562 623 ntTSL 34.31□□□□□ -1.725e-13■■■□□ 17.1
SND1Q7KZF4 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.432e-7■■■□□ 17.1
SND1Q7KZF4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.03■■□□□ 1.123e-9■■■□□ 17.1
SND1Q7KZF4 TMEM179B-204ENST00000532586 839 ntTSL 217.68■□□□□ 0.423e-9■■■□□ 17.1
SND1Q7KZF4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.323e-9■■■□□ 17.1
SND1Q7KZF4 TMEM179B-203ENST00000532345 845 ntTSL 210.41□□□□□ -0.743e-9■■■□□ 17.1
SND1Q7KZF4 MRPS18B-209ENST00000492316 512 ntTSL 29.87□□□□□ -0.831e-8■■■□□ 17.1
SND1Q7KZF4 NCSTN-205ENST00000424754 659 ntTSL 59.69□□□□□ -0.865e-7■■■□□ 17.1
SND1Q7KZF4 OS9-214ENST00000550438 635 ntTSL 29.98□□□□□ -0.814e-15■■■□□ 17.1
SND1Q7KZF4 MESD-204ENST00000560189 936 ntTSL 510.13□□□□□ -0.792e-9■■■□□ 17.1
SND1Q7KZF4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■■□□ 17.1
SND1Q7KZF4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.272e-6■■■□□ 17.1
SND1Q7KZF4 MDH1-211ENST00000484538 910 ntTSL 211.42□□□□□ -0.582e-11■■■□□ 17.1
SND1Q7KZF4 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC10.9□□□□□ -0.662e-6■■■□□ 17.1
SND1Q7KZF4 EIF2B3-204ENST00000439363 892 ntTSL 39.72□□□□□ -0.852e-6■■■□□ 17.1
SND1Q7KZF4 HEXA-202ENST00000563762 1174 ntTSL 216.56■□□□□ 0.242e-7■■■□□ 17.1
SND1Q7KZF4 HEXA-207ENST00000566672 1397 ntTSL 213.61□□□□□ -0.232e-7■■■□□ 17.1
SND1Q7KZF4 HEXA-215ENST00000569410 1351 ntTSL 59.94□□□□□ -0.822e-7■■■□□ 17.1
SND1Q7KZF4 CFB-282ENST00000483004 940 ntTSL 57.5□□□□□ -1.214e-12■■■□□ 17.1
SND1Q7KZF4 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 05e-7■■■□□ 17.1
SND1Q7KZF4 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.78□□□□□ -0.045e-7■■■□□ 17.1
SND1Q7KZF4 EMC4-205ENST00000558102 543 ntTSL 216.47■□□□□ 0.237e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.39■□□□□ 0.057e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-206ENST00000558205 1006 ntTSL 215.26■□□□□ 0.037e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.26■□□□□ 0.037e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.877e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-212ENST00000561246 2019 ntTSL 28.93□□□□□ -0.987e-9■■■□□ 17.1
SND1Q7KZF4 EMC4-211ENST00000560947 709 ntTSL 38.68□□□□□ -1.027e-9■■■□□ 17.1
SND1Q7KZF4 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)11.21□□□□□ -0.615e-7■■■□□ 17.1
SND1Q7KZF4 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)10.74□□□□□ -0.695e-7■■■□□ 17.1
SND1Q7KZF4 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)10.28□□□□□ -0.765e-7■■■□□ 17.1
SND1Q7KZF4 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)10.17□□□□□ -0.785e-7■■■□□ 17.1
SND1Q7KZF4 ITGA2-202ENST00000503810 3782 ntTSL 59.48□□□□□ -0.895e-7■■■□□ 17.1
SND1Q7KZF4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.155e-7■■■□□ 17.1
SND1Q7KZF4 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)12.9□□□□□ -0.345e-16■■■□□ 17.1
SND1Q7KZF4 ELOVL1-209ENST00000479439 646 ntTSL 514.12□□□□□ -0.151e-8■■■□□ 17.1
SND1Q7KZF4 ELOVL1-204ENST00000465321 726 ntTSL 513.48□□□□□ -0.251e-8■■■□□ 17.1
SND1Q7KZF4 ELOVL1-213ENST00000496932 779 ntTSL 313.12□□□□□ -0.311e-8■■■□□ 17.1
SND1Q7KZF4 ELOVL1-210ENST00000479686 417 ntTSL 313.02□□□□□ -0.331e-8■■■□□ 17.1
SND1Q7KZF4 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.4■□□□□ 0.061e-8■■■□□ 17.1
SND1Q7KZF4 UGT2A3-202ENST00000503012 1645 ntTSL 26.57□□□□□ -1.364e-7■■■□□ 17.1
SND1Q7KZF4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.233e-6■■■□□ 17
SND1Q7KZF4 GLB1-210ENST00000461475 816 ntTSL 316.87■□□□□ 0.292e-10■■■□□ 17
SND1Q7KZF4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-8■■■□□ 17
SND1Q7KZF4 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.63□□□□□ -0.231e-8■■■□□ 17
SND1Q7KZF4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.79e-12■■■□□ 17
SND1Q7KZF4 SLC4A2-217ENST00000493040 556 ntTSL 416.78■□□□□ 0.289e-12■■■□□ 17
SND1Q7KZF4 SLC4A2-211ENST00000482697 383 ntTSL 316.68■□□□□ 0.269e-12■■■□□ 17
SND1Q7KZF4 ERGIC3-215ENST00000486268 584 ntTSL 212.34□□□□□ -0.435e-29■■■□□ 17
SND1Q7KZF4 ERGIC3-201ENST00000279052 2846 ntTSL 211.58□□□□□ -0.565e-29■■■□□ 17
SND1Q7KZF4 MIR6848-201ENST00000611213 70 ntBASIC9.84□□□□□ -0.834e-8■■■□□ 17
SND1Q7KZF4 FREM1-205ENST00000427623 1421 ntTSL 59.75□□□□□ -0.852e-10■■■□□ 17
SND1Q7KZF4 ERGIC3-204ENST00000411577 601 ntTSL 29.57□□□□□ -0.885e-29■■■□□ 17
SND1Q7KZF4 LAMB1-209ENST00000472714 1540 ntTSL 27.09□□□□□ -1.272e-7■■■□□ 17
SND1Q7KZF4 SUMF2-206ENST00000413952 881 ntTSL 320.41■□□□□ 0.865e-7■■■□□ 17
SND1Q7KZF4 THBS1-203ENST00000466755 500 ntTSL 214.4□□□□□ -0.14e-10■■■□□ 17
SND1Q7KZF4 HMGCS1-206ENST00000511774 500 ntTSL 419.72■□□□□ 0.752e-6■■■□□ 17
SND1Q7KZF4 PLOD1-205ENST00000465920 871 ntTSL 512.76□□□□□ -0.374e-11■■■□□ 17
SND1Q7KZF4 FBLN1-216ENST00000465578 481 ntTSL 513.12□□□□□ -0.311e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.39■■■□□ 2.147e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.89■■■□□ 2.067e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)27.58■■■□□ 2.017e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.387e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)20.94■□□□□ 0.947e-7■■■□□ 17
SND1Q7KZF4 SIGMAR1-207ENST00000497006 610 ntTSL 318.34■□□□□ 0.537e-7■■■□□ 17
SND1Q7KZF4 CTSB-225ENST00000532409 839 ntTSL 215.99■□□□□ 0.151e-14■■■□□ 17
SND1Q7KZF4 IFITM2-201ENST00000399815 382 ntTSL 313.82□□□□□ -0.25e-29■■■□□ 17
SND1Q7KZF4 PRCP-215ENST00000533126 354 ntTSL 415.87■□□□□ 0.133e-7■■■□□ 17
SND1Q7KZF4 PRCP-207ENST00000528082 491 ntTSL 511.5□□□□□ -0.573e-7■■■□□ 17
SND1Q7KZF4 PRCP-208ENST00000529671 611 ntTSL 48.84□□□□□ -0.993e-7■■■□□ 17
Retrieved 100 of 13,567 protein–RNA pairs in 133.2 ms