Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 KRT19P1-201ENST00000405746 1186 ntBASIC20.76■□□□□ 0.91
PACS1Q6VY07 NTF6G-201ENST00000591094 616 ntBASIC20.76■□□□□ 0.91
PACS1Q6VY07 AP001160.3-201ENST00000601484 763 ntBASIC20.76■□□□□ 0.91
PACS1Q6VY07 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.76■□□□□ 0.91
PACS1Q6VY07 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PACS1Q6VY07 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PACS1Q6VY07 AC061975.6-201ENST00000579045 1553 ntBASIC20.76■□□□□ 0.91
PACS1Q6VY07 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.75■□□□□ 0.91
PACS1Q6VY07 MIR5787-201ENST00000611784 55 ntBASIC20.75■□□□□ 0.91
PACS1Q6VY07 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS1Q6VY07 AC020907.5-201ENST00000624372 1936 ntBASIC20.74■□□□□ 0.91
PACS1Q6VY07 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 KRT18P20-201ENST00000548986 1279 ntBASIC20.74■□□□□ 0.91
PACS1Q6VY07 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PACS1Q6VY07 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS1Q6VY07 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 KRT18P5-201ENST00000436075 1291 ntBASIC20.73■□□□□ 0.91
PACS1Q6VY07 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS1Q6VY07 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 FP700111.2-201ENST00000619190 1892 ntBASIC20.73■□□□□ 0.91
PACS1Q6VY07 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS1Q6VY07 KRT16P2-201ENST00000414673 1423 ntBASIC20.72■□□□□ 0.91
PACS1Q6VY07 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PACS1Q6VY07 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PACS1Q6VY07 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS1Q6VY07 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms