Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD3Q6PCD5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 SLC29A4P1-201ENST00000398760 971 ntBASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 AL138781.1-201ENST00000566567 1274 ntBASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 OR10C1-204ENST00000622521 1039 ntBASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RFWD3Q6PCD5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 AL162412.1-201ENST00000567129 965 ntBASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.41■■□□□ 1.02
RFWD3Q6PCD5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 RARRES2P4-201ENST00000514074 484 ntBASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD3Q6PCD5 MKRN4P-201ENST00000444706 1521 ntBASIC21.39■■□□□ 1.02
RFWD3Q6PCD5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RFWD3Q6PCD5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 AC142086.2-201ENST00000569753 217 ntBASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.38■■□□□ 1.01
RFWD3Q6PCD5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms