Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.27■□□□□ 0.2
FAM78BQ5VT40 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
FAM78BQ5VT40 SYT6-210ENST00000641643 1587 ntBASIC16.26■□□□□ 0.19
FAM78BQ5VT40 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 AC020907.5-201ENST00000624372 1936 ntBASIC16.25■□□□□ 0.19
FAM78BQ5VT40 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 DUX4L19-201ENST00000557448 1267 ntBASIC16.25■□□□□ 0.19
FAM78BQ5VT40 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
FAM78BQ5VT40 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 AC007225.1-201ENST00000566331 1836 ntBASIC16.24■□□□□ 0.19
FAM78BQ5VT40 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.24■□□□□ 0.19
FAM78BQ5VT40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FAM78BQ5VT40 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 AL136116.3-201ENST00000402907 1138 ntBASIC16.23■□□□□ 0.19
FAM78BQ5VT40 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM78BQ5VT40 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms