Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00242Q5T6M2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 BX842568.3-201ENST00000418104 571 ntBASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 AC092720.2-201ENST00000602388 1665 ntBASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00242Q5T6M2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 AC087289.5-201ENST00000586076 3175 ntBASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 AC005224.4-201ENST00000583262 1652 ntBASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 TCF3P1-201ENST00000423021 1937 ntBASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 SMG8-203ENST00000578922 2178 ntBASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00242Q5T6M2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00242Q5T6M2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC00242Q5T6M2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00242Q5T6M2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms