Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SGO1Q5FBB7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 AC010141.2-201ENST00000452426 721 ntBASIC19.93■□□□□ 0.78
SGO1Q5FBB7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 KRT18P14-201ENST00000534205 1250 ntBASIC19.93■□□□□ 0.78
SGO1Q5FBB7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 TERF1P2-201ENST00000583350 1212 ntBASIC19.93■□□□□ 0.78
SGO1Q5FBB7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SGO1Q5FBB7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 AC011484.1-201ENST00000377652 1995 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L2-201ENST00000561772 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L6-201ENST00000626483 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L1-201ENST00000627662 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L8-201ENST00000629013 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L3-201ENST00000630187 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L7-201ENST00000630678 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 DUX4L5-201ENST00000630834 1275 ntBASIC19.92■□□□□ 0.78
SGO1Q5FBB7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SGO1Q5FBB7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 AC027702.1-201ENST00000563810 1770 ntBASIC19.91■□□□□ 0.78
SGO1Q5FBB7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 AP005212.1-201ENST00000581547 1997 ntBASIC19.91■□□□□ 0.78
SGO1Q5FBB7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 AL391422.3-201ENST00000603791 2761 ntBASIC19.91■□□□□ 0.78
SGO1Q5FBB7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 AC004854.2-201ENST00000608450 1441 ntBASIC19.91■□□□□ 0.78
SGO1Q5FBB7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.91■□□□□ 0.78
SGO1Q5FBB7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 AC245052.3-201ENST00000450182 901 ntBASIC19.9■□□□□ 0.78
SGO1Q5FBB7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms