Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRTCAP3Q53RY4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 AC069544.1-201ENST00000609399 999 ntBASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 C9orf163-202ENST00000624034 2573 ntBASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.46■□□□□ 0.55
KRTCAP3Q53RY4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.46■□□□□ 0.54
KRTCAP3Q53RY4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
KRTCAP3Q53RY4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
KRTCAP3Q53RY4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KRTCAP3Q53RY4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTCAP3Q53RY4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 AC079834.2-201ENST00000609776 1949 ntBASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRTCAP3Q53RY4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms