Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 AC068473.5-201ENST00000616428 2072 ntBASIC22.74■■□□□ 1.23
TRIM60Q495X7 ARMC10P1-201ENST00000313754 855 ntBASIC22.74■■□□□ 1.23
TRIM60Q495X7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM60Q495X7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM60Q495X7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
TRIM60Q495X7 AC010542.4-201ENST00000563151 1910 ntBASIC22.74■■□□□ 1.23
TRIM60Q495X7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM60Q495X7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM60Q495X7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM60Q495X7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.73■■□□□ 1.23
TRIM60Q495X7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 AC026471.5-201ENST00000615068 467 ntBASIC22.72■■□□□ 1.23
TRIM60Q495X7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM60Q495X7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM60Q495X7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM60Q495X7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM60Q495X7 AC116050.2-201ENST00000612102 1779 ntBASIC22.71■■□□□ 1.23
TRIM60Q495X7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.7■■□□□ 1.23
TRIM60Q495X7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM60Q495X7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM60Q495X7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.7■■□□□ 1.22
TRIM60Q495X7 AP003071.4-201ENST00000562276 1284 ntBASIC22.7■■□□□ 1.22
TRIM60Q495X7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TRIM60Q495X7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.7■■□□□ 1.22
TRIM60Q495X7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
TRIM60Q495X7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.7■■□□□ 1.22
TRIM60Q495X7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM60Q495X7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM60Q495X7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM60Q495X7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 AC087633.2-202ENST00000565166 1439 ntBASIC22.69■■□□□ 1.22
TRIM60Q495X7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM60Q495X7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM60Q495X7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TRIM60Q495X7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM60Q495X7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms