Protein–RNA interactions for Protein: Q12441

TY1A-DR3, Transposon Ty1-DR3 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-DR3Q12441 TAF5YBR198C 2397 nt4.1□□□□□ -1.75
TY1A-DR3Q12441 YMR102CYMR102C 2505 nt4.1□□□□□ -1.75
TY1A-DR3Q12441 JJJ2YJL162C 1752 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 FRE8YLR047C 2061 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 ABF1YKL112W 2196 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 PIM1YBL022C 3402 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 FAP1YNL023C 2898 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 CDC15YAR019C 2925 nt4.09□□□□□ -1.75
TY1A-DR3Q12441 PAU13YHL046C 363 nt4.08□□□□□ -1.76
TY1A-DR3Q12441 GIP4YAL031C 2283 nt4.08□□□□□ -1.76
TY1A-DR3Q12441 YPL025CYPL025C 558 nt4.08□□□□□ -1.76
TY1A-DR3Q12441 GPI1YGR216C 1830 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 SLP1YOR154W 1764 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 SSY1YDR160W 2559 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 ISA1YLL027W 753 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 PAU23YLR037C 375 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 YLR053CYLR053C 327 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 YNL057WYNL057W 333 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 ISU1YPL135W 498 nt4.07□□□□□ -1.76
TY1A-DR3Q12441 RIA1YNL163C 3333 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 PMP3YDR276C 168 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 VTC1YER072W 390 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 MTC3YGL226W 372 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 LSM1YJL124C 519 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 SOK2YMR016C 2358 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 TPS2YDR074W 2691 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 HFA1YMR207C 6372 nt4.06□□□□□ -1.76
TY1A-DR3Q12441 TGL4YKR089C 2733 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 NUP2YLR335W 2163 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 YCR075W-AYCR075W-A 228 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 MRP10YDL045W-A 288 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 TSA2YDR453C 591 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 YGR269WYGR269W 327 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 FBP1YLR377C 1047 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 MET4YNL103W 2019 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 PUF3YLL013C 2640 nt4.05□□□□□ -1.76
TY1A-DR3Q12441 YJL020W-AYJL020W-A 258 nt4.04□□□□□ -1.76
TY1A-DR3Q12441 TIM8YJR135W-A 264 nt4.04□□□□□ -1.76
TY1A-DR3Q12441 ATP15YPL271W 189 nt4.04□□□□□ -1.76
TY1A-DR3Q12441 PMC1YGL006W 3522 nt4.04□□□□□ -1.76
TY1A-DR3Q12441 LYS2YBR115C 4179 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 GAL11YOL051W 3246 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 LCB5YLR260W 2064 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 YDR230WYDR230W 348 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 tF(GAA)QtF(GAA)Q 75 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 RFC3YNL290W 1023 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 YCF1YDR135C 4548 nt4.03□□□□□ -1.76
TY1A-DR3Q12441 RED1YLR263W 2484 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 YMR196WYMR196W 3267 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)CtK(CUU)C 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)D1tK(CUU)D1 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)D2tK(CUU)D2 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)E1tK(CUU)E1 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)E2tK(CUU)E2 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)FtK(CUU)F 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)G1tK(CUU)G1 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)G2tK(CUU)G2 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)G3tK(CUU)G3 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)ItK(CUU)I 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)JtK(CUU)J 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)KtK(CUU)K 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)MtK(CUU)M 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 tK(CUU)PtK(CUU)P 73 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 RPL34BYIL052C 366 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 RAD1YPL022W 3303 nt4.02□□□□□ -1.77
TY1A-DR3Q12441 NKP2YLR315W 462 nt4.01□□□□□ -1.77
TY1A-DR3Q12441 ROD1YOR018W 2514 nt4.01□□□□□ -1.77
TY1A-DR3Q12441 AKL1YBR059C 3327 nt4.01□□□□□ -1.77
TY1A-DR3Q12441 PDC2YDR081C 2778 nt4.01□□□□□ -1.77
TY1A-DR3Q12441 VID28YIL017C 2766 nt4□□□□□ -1.77
TY1A-DR3Q12441 LRE1YCL051W 1752 nt4□□□□□ -1.77
TY1A-DR3Q12441 RPS23AYGR118W 438 nt4□□□□□ -1.77
TY1A-DR3Q12441 YNL097W-AYNL097W-A 156 nt4□□□□□ -1.77
TY1A-DR3Q12441 CDC45YLR103C 1953 nt4□□□□□ -1.77
TY1A-DR3Q12441 SPT10YJL127C 1923 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 YSH1YLR277C 2340 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 ORC2YBR060C 1863 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 snR60snR60 104 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 RPS18AYDR450W 441 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 YDR545C-AYDR545C-A 480 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 FAA2YER015W 2235 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 SEN1YLR430W 6696 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 VHS3YOR054C 2025 nt3.99□□□□□ -1.77
TY1A-DR3Q12441 MNT3YIL014W 1893 nt3.98□□□□□ -1.77
TY1A-DR3Q12441 YBL053WYBL053W 375 nt3.98□□□□□ -1.77
TY1A-DR3Q12441 RPL32YBL092W 393 nt3.98□□□□□ -1.77
TY1A-DR3Q12441 HHF1YBR009C 312 nt3.98□□□□□ -1.77
TY1A-DR3Q12441 PFK1YGR240C 2964 nt3.98□□□□□ -1.77
TY1A-DR3Q12441 EGT2YNL327W 3126 nt3.97□□□□□ -1.77
TY1A-DR3Q12441 TIM13YGR181W 318 nt3.97□□□□□ -1.77
TY1A-DR3Q12441 CCW14YLR390W-A 717 nt3.97□□□□□ -1.77
TY1A-DR3Q12441 SSH4YKL124W 1740 nt3.97□□□□□ -1.77
TY1A-DR3Q12441 GMC1YDR506C 1827 nt3.97□□□□□ -1.77
TY1A-DR3Q12441 PEP5YMR231W 3090 nt3.96□□□□□ -1.77
TY1A-DR3Q12441 TRM7YBR061C 933 nt3.96□□□□□ -1.78
TY1A-DR3Q12441 YPK9YOR291W 4419 nt3.96□□□□□ -1.78
TY1A-DR3Q12441 CAF130YGR134W 3369 nt3.96□□□□□ -1.78
TY1A-DR3Q12441 PHO8YDR481C 1701 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 ATP25YMR098C 1839 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 RPG1YBR079C 2895 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms