Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM3P98179 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RBM3P98179 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 AC020907.5-201ENST00000624372 1936 ntBASIC12.99□□□□□ -0.33
RBM3P98179 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RBM3P98179 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RBM3P98179 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RBM3P98179 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RBM3P98179 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM3P98179 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RBM3P98179 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 LETM1P2-201ENST00000597330 2178 ntBASIC12.98□□□□□ -0.33
RBM3P98179 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC12.98□□□□□ -0.33
RBM3P98179 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RBM3P98179 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 GDI1-215ENST00000630693 786 ntTSL 4 BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 AC004687.1-201ENST00000579003 1625 ntBASIC12.98□□□□□ -0.33
RBM3P98179 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RBM3P98179 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RBM3P98179 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RBM3P98179 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RBM3P98179 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RBM3P98179 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RBM3P98179 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.97□□□□□ -0.33
RBM3P98179 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RBM3P98179 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 AC112907.3-201ENST00000577781 2400 ntBASIC12.97□□□□□ -0.33
RBM3P98179 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
RBM3P98179 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 AC022413.1-201ENST00000624602 984 ntBASIC12.97□□□□□ -0.33
RBM3P98179 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RBM3P98179 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RBM3P98179 AC027702.1-201ENST00000563810 1770 ntBASIC12.97□□□□□ -0.33
RBM3P98179 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.96□□□□□ -0.33
RBM3P98179 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RBM3P98179 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 AC116562.4-201ENST00000641316 2276 ntBASIC12.96□□□□□ -0.33
RBM3P98179 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RBM3P98179 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms