Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.141e-11■■■□□ 15.2
LSM11P83369 SLC39A7-204ENST00000463972 1410 ntTSL 212.36□□□□□ -0.431e-11■■■□□ 15.2
LSM11P83369 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.79■□□□□ 0.125e-7■■■□□ 15.2
LSM11P83369 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.025e-7■■■□□ 15.2
LSM11P83369 RECQL4-204ENST00000531875 988 ntTSL 514.24□□□□□ -0.135e-7■■■□□ 15.2
LSM11P83369 DCXR-208ENST00000579004 341 ntTSL 310.93□□□□□ -0.666e-9■■■□□ 15.2
LSM11P83369 DCXR-202ENST00000577286 553 ntTSL 29.96□□□□□ -0.826e-9■■■□□ 15.2
LSM11P83369 MIR142-201ENST00000384835 87 ntBASIC8.28□□□□□ -1.081e-323■■■□□ 15.2
LSM11P83369 DAZAP1-210ENST00000592453 1021 ntTSL 513.76□□□□□ -0.211e-7■■■□□ 15.2
LSM11P83369 TAF15-206ENST00000603967 656 ntTSL 314.81□□□□□ -0.043e-13■■■□□ 15.2
LSM11P83369 SRSF2-210ENST00000589919 595 ntTSL 29.81□□□□□ -0.842e-10■■■□□ 15.2
LSM11P83369 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.136e-6■■■□□ 15.2
LSM11P83369 RSRP1-222ENST00000570063 1821 ntTSL 516.65■□□□□ 0.268e-14■■■□□ 15.2
LSM11P83369 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.018e-14■■■□□ 15.2
LSM11P83369 RSRP1-217ENST00000568254 2013 ntTSL 1 (best)14.33□□□□□ -0.128e-14■■■□□ 15.2
LSM11P83369 RSRP1-213ENST00000566395 824 ntTSL 314.07□□□□□ -0.168e-14■■■□□ 15.2
LSM11P83369 RSRP1-204ENST00000473314 3034 ntTSL 213.29□□□□□ -0.288e-14■■■□□ 15.2
LSM11P83369 RSRP1-212ENST00000565733 772 ntTSL 312.7□□□□□ -0.388e-14■■■□□ 15.2
LSM11P83369 RSRP1-210ENST00000564223 395 ntTSL 312.08□□□□□ -0.488e-14■■■□□ 15.2
LSM11P83369 RSRP1-207ENST00000498238 2941 ntTSL 211.78□□□□□ -0.528e-14■■■□□ 15.2
LSM11P83369 RSRP1-221ENST00000569495 901 ntTSL 211.04□□□□□ -0.648e-14■■■□□ 15.2
LSM11P83369 FANCA-206ENST00000561660 762 ntTSL 515.65■□□□□ 0.14e-7■■■□□ 15.2
LSM11P83369 LUC7L-220ENST00000495349 1006 ntTSL 212.3□□□□□ -0.444e-8■■■□□ 15.2
LSM11P83369 LUC7L-206ENST00000419516 1211 ntTSL 512.3□□□□□ -0.444e-8■■■□□ 15.2
LSM11P83369 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC11.09□□□□□ -0.634e-8■■■□□ 15.2
LSM11P83369 LUC7L-205ENST00000418978 989 ntTSL 510.8□□□□□ -0.684e-8■■■□□ 15.2
LSM11P83369 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.413e-7■■■□□ 15.1
LSM11P83369 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC10.21□□□□□ -0.773e-7■■■□□ 15.1
LSM11P83369 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC9.67□□□□□ -0.863e-7■■■□□ 15.1
LSM11P83369 NUP85-220ENST00000583070 907 ntTSL 59.54□□□□□ -0.883e-7■■■□□ 15.1
LSM11P83369 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC9.32□□□□□ -0.923e-7■■■□□ 15.1
LSM11P83369 NUP85-216ENST00000581104 2233 ntTSL 28.6□□□□□ -1.033e-7■■■□□ 15.1
LSM11P83369 RHOT2-212ENST00000564659 854 ntTSL 213.95□□□□□ -0.187e-8■■■□□ 15.1
LSM11P83369 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.331e-10■■■□□ 15.1
LSM11P83369 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.021e-8■■■□□ 15.1
LSM11P83369 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.121e-8■■■□□ 15.1
LSM11P83369 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.151e-8■■■□□ 15.1
LSM11P83369 SSFA2-208ENST00000454579 3772 ntTSL 210.2□□□□□ -0.781e-8■■■□□ 15.1
LSM11P83369 SSFA2-206ENST00000440623 5420 ntTSL 27.06□□□□□ -1.281e-8■■■□□ 15.1
LSM11P83369 SSFA2-204ENST00000416081 5067 ntTSL 1 (best)6.8□□□□□ -1.321e-8■■■□□ 15.1
LSM11P83369 ACAD11-202ENST00000469042 3276 ntTSL 210.31□□□□□ -0.768e-9■■■□□ 15.1
LSM11P83369 ISYNA1-204ENST00000577916 2148 ntTSL 523■■□□□ 1.271e-8■■■□□ 15.1
LSM11P83369 ISYNA1-211ENST00000582811 2039 ntTSL 220.34■□□□□ 0.851e-8■■■□□ 15.1
LSM11P83369 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.611e-8■■■□□ 15.1
LSM11P83369 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.09■□□□□ 0.171e-8■■■□□ 15.1
LSM11P83369 ISYNA1-210ENST00000582770 1654 ntTSL 216.02■□□□□ 0.151e-8■■■□□ 15.1
LSM11P83369 ISYNA1-203ENST00000577820 1466 ntTSL 512.81□□□□□ -0.361e-8■■■□□ 15.1
LSM11P83369 FANCA-201ENST00000305699 1430 ntTSL 213.48□□□□□ -0.257e-7■■■□□ 15.1
LSM11P83369 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.712e-11■■■□□ 15
LSM11P83369 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.21■□□□□ 0.672e-11■■■□□ 15
LSM11P83369 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.47■□□□□ 0.232e-11■■■□□ 15
LSM11P83369 NARF-203ENST00000374611 1722 ntTSL 514.92□□□□□ -0.022e-11■■■□□ 15
LSM11P83369 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.74□□□□□ -0.052e-11■■■□□ 15
LSM11P83369 NARF-220ENST00000582907 1454 ntTSL 512.34□□□□□ -0.432e-11■■■□□ 15
LSM11P83369 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.522e-11■■■□□ 15
LSM11P83369 NARF-225ENST00000584445 2484 ntTSL 211.12□□□□□ -0.632e-11■■■□□ 15
LSM11P83369 NARF-209ENST00000577812 2598 ntTSL 511.06□□□□□ -0.642e-11■■■□□ 15
LSM11P83369 NARF-211ENST00000578820 625 ntTSL 39.41□□□□□ -0.92e-11■■■□□ 15
LSM11P83369 NARF-227ENST00000584965 300 ntTSL 39.02□□□□□ -0.972e-11■■■□□ 15
LSM11P83369 NARF-222ENST00000583908 430 ntTSL 38.64□□□□□ -1.032e-11■■■□□ 15
LSM11P83369 NARF-226ENST00000584513 500 ntTSL 38.39□□□□□ -1.072e-11■■■□□ 15
LSM11P83369 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.729e-9■■■□□ 15
LSM11P83369 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.59e-9■■■□□ 15
LSM11P83369 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.419e-9■■■□□ 15
LSM11P83369 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.11■□□□□ 0.339e-9■■■□□ 15
LSM11P83369 ENTPD6-218ENST00000490187 1918 ntTSL 214.35□□□□□ -0.119e-9■■■□□ 15
LSM11P83369 ENTPD6-217ENST00000485936 2588 ntTSL 214.32□□□□□ -0.129e-9■■■□□ 15
LSM11P83369 ENTPD6-204ENST00000376666 2100 ntTSL 514.16□□□□□ -0.149e-9■■■□□ 15
LSM11P83369 LY6G5B-209ENST00000471088 677 ntTSL 510.96□□□□□ -0.657e-8■■■□□ 15
LSM11P83369 SRSF5-208ENST00000554929 947 ntTSL 212.83□□□□□ -0.364e-10■■■□□ 15
LSM11P83369 SELENBP1-207ENST00000443708 1724 ntTSL 516.04■□□□□ 0.161e-7■■■□□ 15
LSM11P83369 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-7■■■□□ 15
LSM11P83369 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.86■□□□□ 0.131e-7■■■□□ 15
LSM11P83369 SELENBP1-212ENST00000463664 1922 ntTSL 515.53■□□□□ 0.081e-7■■■□□ 15
LSM11P83369 SELENBP1-202ENST00000423070 1887 ntTSL 513.25□□□□□ -0.291e-7■■■□□ 15
LSM11P83369 SELENBP1-218ENST00000493560 1963 ntTSL 512.76□□□□□ -0.371e-7■■■□□ 15
LSM11P83369 SELENBP1-214ENST00000470345 2128 ntTSL 212.28□□□□□ -0.441e-7■■■□□ 15
LSM11P83369 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.26□□□□□ -0.451e-7■■■□□ 15
LSM11P83369 SELENBP1-206ENST00000427977 1611 ntTSL 511.96□□□□□ -0.51e-7■■■□□ 15
LSM11P83369 CHTF18-212ENST00000493715 691 ntTSL 311.94□□□□□ -0.51e-7■■■□□ 15
LSM11P83369 SELENBP1-216ENST00000474352 2840 ntTSL 211.81□□□□□ -0.521e-7■■■□□ 15
LSM11P83369 SELENBP1-209ENST00000455397 1521 ntTSL 510.12□□□□□ -0.791e-7■■■□□ 15
LSM11P83369 RHBG-209ENST00000622297 720 ntTSL 512.12□□□□□ -0.479e-10■■■□□ 15
LSM11P83369 AL662899.3-203ENST00000409691 1903 ntTSL 313.38□□□□□ -0.272e-7■■■□□ 15
LSM11P83369 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.652e-7■■■□□ 15
LSM11P83369 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.712e-7■■■□□ 15
LSM11P83369 YDJC-205ENST00000468686 1423 ntTSL 1 (best)18.63■□□□□ 0.571e-7■■■□□ 15
LSM11P83369 YDJC-207ENST00000482998 1388 ntTSL 517.46■□□□□ 0.391e-7■■■□□ 15
LSM11P83369 YDJC-204ENST00000464015 1613 ntTSL 1 (best)17.28■□□□□ 0.361e-7■■■□□ 15
LSM11P83369 YDJC-206ENST00000473985 1494 ntTSL 516.94■□□□□ 0.31e-7■■■□□ 15
LSM11P83369 YDJC-203ENST00000415762 1410 ntTSL 1 (best)16.17■□□□□ 0.181e-7■■■□□ 15
LSM11P83369 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.11e-7■■■□□ 15
LSM11P83369 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.22■□□□□ 0.031e-7■■■□□ 15
LSM11P83369 FANCA-231ENST00000568626 727 ntTSL 310.72□□□□□ -0.698e-7■■■□□ 15
LSM11P83369 HGFAC-202ENST00000506132 743 ntTSL 216.29■□□□□ 0.25e-10■■■□□ 14.9
LSM11P83369 AP1G2-232ENST00000557391 459 ntTSL 27.73□□□□□ -1.172e-8■■■□□ 14.9
LSM11P83369 SRRT-208ENST00000469602 376 ntTSL 28.52□□□□□ -1.053e-7■■■□□ 14.9
LSM11P83369 NLGN2-202ENST00000570940 581 ntTSL 314.02□□□□□ -0.178e-7■■■□□ 14.9
LSM11P83369 LY6G5B-208ENST00000409525 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.732e-9■■■□□ 14.9
LSM11P83369 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC10.42□□□□□ -0.742e-9■■■□□ 14.9
Retrieved 100 of 11,495 protein–RNA pairs in 80.9 ms