RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
SSFA2-204ENST00000416081 HRCP23327 699 aa12.16□□□□□ -0.46
SSFA2-204ENST00000416081 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
SSFA2-204ENST00000416081 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.48
SSFA2-204ENST00000416081 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
SSFA2-204ENST00000416081 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
SSFA2-204ENST00000416081 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
SSFA2-204ENST00000416081 CHIC1Q5VXU3 224 aa11.74□□□□□ -0.53
SSFA2-204ENST00000416081 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
SSFA2-204ENST00000416081 MYO15BQ96JP2 1530 aa11.63□□□□□ -0.55
SSFA2-204ENST00000416081 MYT1Q01538 1121 aa11.61□□□□□ -0.55
SSFA2-204ENST00000416081 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
SSFA2-204ENST00000416081 DCAF1Q9Y4B6 1507 aa11.57□□□□□ -0.56
SSFA2-204ENST00000416081 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
SSFA2-204ENST00000416081 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
SSFA2-204ENST00000416081 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
SSFA2-204ENST00000416081 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
SSFA2-204ENST00000416081 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
SSFA2-204ENST00000416081 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
SSFA2-204ENST00000416081 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.6
SSFA2-204ENST00000416081 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
SSFA2-204ENST00000416081 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
SSFA2-204ENST00000416081 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
SSFA2-204ENST00000416081 FAM9AQ8IZU1 332 aaPredicted RBP11.18□□□□□ -0.62
SSFA2-204ENST00000416081 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
SSFA2-204ENST00000416081 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
SSFA2-204ENST00000416081 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
SSFA2-204ENST00000416081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
SSFA2-204ENST00000416081 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
SSFA2-204ENST00000416081 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
SSFA2-204ENST00000416081 TTBK1Q5TCY1 1321 aaPredicted RBP10.9□□□□□ -0.66
SSFA2-204ENST00000416081 RSF1Q96T23 1441 aaPredicted RBP10.8□□□□□ -0.68
SSFA2-204ENST00000416081 ABCC9O60706 1549 aa10.8□□□□□ -0.68
SSFA2-204ENST00000416081 CLSPNQ9HAW4 1339 aa10.77□□□□□ -0.69
SSFA2-204ENST00000416081 MIER1Q8N108 512 aa10.75□□□□□ -0.69
SSFA2-204ENST00000416081 RB1CC1Q8TDY2 1594 aa10.73□□□□□ -0.69
SSFA2-204ENST00000416081 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
SSFA2-204ENST00000416081 APLP2Q06481 763 aa10.66□□□□□ -0.7
SSFA2-204ENST00000416081 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
SSFA2-204ENST00000416081 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
SSFA2-204ENST00000416081 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
SSFA2-204ENST00000416081 SUPT16HQ9Y5B9 1047 aaKnown RBP10.61□□□□□ -0.71
SSFA2-204ENST00000416081 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
SSFA2-204ENST00000416081 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
SSFA2-204ENST00000416081 CEP162Q5TB80 1403 aa10.6□□□□□ -0.71
SSFA2-204ENST00000416081 NEFLP07196 543 aa10.55□□□□□ -0.72
SSFA2-204ENST00000416081 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
SSFA2-204ENST00000416081 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
SSFA2-204ENST00000416081 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
SSFA2-204ENST00000416081 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
SSFA2-204ENST00000416081 BCANQ96GW7 911 aa10.49□□□□□ -0.73
SSFA2-204ENST00000416081 EEA1Q15075 1411 aa10.47□□□□□ -0.73
SSFA2-204ENST00000416081 CECR2Q9BXF3 1484 aa10.44□□□□□ -0.74
SSFA2-204ENST00000416081 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
SSFA2-204ENST00000416081 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
SSFA2-204ENST00000416081 FKBP8Q14318 412 aa10.43□□□□□ -0.74
SSFA2-204ENST00000416081 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
SSFA2-204ENST00000416081 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
SSFA2-204ENST00000416081 SOGA1O94964 1423 aa10.4□□□□□ -0.75
SSFA2-204ENST00000416081 CLIP1P30622 1438 aa10.37□□□□□ -0.75
SSFA2-204ENST00000416081 WIZO95785 1651 aa10.37□□□□□ -0.75
SSFA2-204ENST00000416081 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
SSFA2-204ENST00000416081 RBM19Q9Y4C8 960 aaKnown RBP10.35□□□□□ -0.75
SSFA2-204ENST00000416081 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
SSFA2-204ENST00000416081 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
SSFA2-204ENST00000416081 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
SSFA2-204ENST00000416081 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
SSFA2-204ENST00000416081 CDK11AQ9UQ88 783 aaPredicted RBP10.31□□□□□ -0.76
SSFA2-204ENST00000416081 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
SSFA2-204ENST00000416081 ITGAEP38570 1179 aa10.28□□□□□ -0.76
SSFA2-204ENST00000416081 ANP32CO43423 234 aa10.28□□□□□ -0.76
SSFA2-204ENST00000416081 NACADO15069 1562 aa10.26□□□□□ -0.77
SSFA2-204ENST00000416081 DDX10Q13206 875 aaKnown RBP10.26□□□□□ -0.77
SSFA2-204ENST00000416081 RUSC2Q8N2Y8 1516 aa10.26□□□□□ -0.77
SSFA2-204ENST00000416081 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
SSFA2-204ENST00000416081 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
SSFA2-204ENST00000416081 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
SSFA2-204ENST00000416081 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
SSFA2-204ENST00000416081 CCER2I3L3R5 266 aa10.18□□□□□ -0.78
SSFA2-204ENST00000416081 BAZ1BQ9UIG0 1483 aaKnown RBP10.18□□□□□ -0.78
SSFA2-204ENST00000416081 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
SSFA2-204ENST00000416081 SMARCA2P51531 1590 aa10.16□□□□□ -0.78
SSFA2-204ENST00000416081 KIF21BO75037 1637 aa10.16□□□□□ -0.78
SSFA2-204ENST00000416081 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
SSFA2-204ENST00000416081 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
SSFA2-204ENST00000416081 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
SSFA2-204ENST00000416081 HNRNPUQ00839 825 aaKnown RBP eCLIP10.13□□□□□ -0.79
SSFA2-204ENST00000416081 RAPGEF2Q9Y4G8 1499 aa10.12□□□□□ -0.79
SSFA2-204ENST00000416081 MSH5O43196 834 aa10.11□□□□□ -0.79
SSFA2-204ENST00000416081 KANK4Q5T7N3 995 aaPredicted RBP10.11□□□□□ -0.79
SSFA2-204ENST00000416081 IRX6P78412 446 aaPredicted RBP10.1□□□□□ -0.79
SSFA2-204ENST00000416081 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
SSFA2-204ENST00000416081 TIMELESSQ9UNS1 1208 aa10.09□□□□□ -0.79
SSFA2-204ENST00000416081 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
SSFA2-204ENST00000416081 RAB3GAP2Q9H2M9 1393 aa10.08□□□□□ -0.8
SSFA2-204ENST00000416081 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
SSFA2-204ENST00000416081 HIRIP3Q9BW71 556 aaPredicted RBP10.08□□□□□ -0.8
SSFA2-204ENST00000416081 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
SSFA2-204ENST00000416081 NBR1Q14596 966 aa10.07□□□□□ -0.8
SSFA2-204ENST00000416081 PPP4R2Q9NY27 417 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms