Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.98■□□□□ 0.47
HIST1H3AP68431 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HIST1H3AP68431 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIST1H3AP68431 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 FP700111.2-201ENST00000619190 1892 ntBASIC17.97■□□□□ 0.47
HIST1H3AP68431 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
HIST1H3AP68431 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HIST1H3AP68431 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 LINC01006-201ENST00000333319 2292 ntBASIC17.96■□□□□ 0.47
HIST1H3AP68431 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H3AP68431 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H3AP68431 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 MIR2861-201ENST00000636310 90 ntBASIC17.96■□□□□ 0.47
HIST1H3AP68431 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H3AP68431 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HIST1H3AP68431 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HIST1H3AP68431 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 AC007322.3-201ENST00000426526 701 ntBASIC17.95■□□□□ 0.46
HIST1H3AP68431 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.95■□□□□ 0.46
HIST1H3AP68431 KRT18P11-201ENST00000435214 1283 ntBASIC17.95■□□□□ 0.46
HIST1H3AP68431 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 AC010536.3-201ENST00000620306 533 ntBASIC17.95■□□□□ 0.46
HIST1H3AP68431 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.95■□□□□ 0.46
HIST1H3AP68431 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HIST1H3AP68431 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 AC020907.5-201ENST00000624372 1936 ntBASIC17.94■□□□□ 0.46
HIST1H3AP68431 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H3AP68431 TERF1P5-201ENST00000477545 1207 ntBASIC17.94■□□□□ 0.46
HIST1H3AP68431 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H3AP68431 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H3AP68431 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HIST1H3AP68431 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H3AP68431 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HIST1H3AP68431 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms