Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CDC42P60953 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CDC42P60953 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42P60953 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC42P60953 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.76■□□□□ 0.59
CDC42P60953 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 AC011484.1-201ENST00000377652 1995 ntBASIC18.75■□□□□ 0.59
CDC42P60953 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDC42P60953 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC42P60953 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDC42P60953 AC011298.3-201ENST00000615796 283 ntBASIC18.75■□□□□ 0.59
CDC42P60953 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDC42P60953 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC42P60953 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42P60953 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 AC009237.3-201ENST00000393279 1427 ntBASIC18.74■□□□□ 0.59
CDC42P60953 BX005040.4-201ENST00000637145 1518 ntBASIC18.74■□□□□ 0.59
CDC42P60953 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 SMG8-203ENST00000578922 2178 ntBASIC18.74■□□□□ 0.59
CDC42P60953 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.74■□□□□ 0.59
CDC42P60953 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDC42P60953 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC42P60953 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
CDC42P60953 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDC42P60953 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42P60953 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC42P60953 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CDC42P60953 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDC42P60953 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC42P60953 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDC42P60953 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CDC42P60953 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDC42P60953 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDC42P60953 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42P60953 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.73■□□□□ 0.59
CDC42P60953 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 AC087289.5-201ENST00000586076 3175 ntBASIC18.72■□□□□ 0.59
CDC42P60953 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 AL035685.1-201ENST00000636663 812 ntBASIC18.72■□□□□ 0.59
CDC42P60953 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.72■□□□□ 0.59
CDC42P60953 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42P60953 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDC42P60953 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.72■□□□□ 0.59
CDC42P60953 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms