Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SRP9P49458 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 TPRG1LP1-201ENST00000598702 760 ntBASIC18.17■□□□□ 0.5
SRP9P49458 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SRP9P49458 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP9P49458 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.17■□□□□ 0.5
SRP9P49458 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRP9P49458 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SRP9P49458 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.16■□□□□ 0.5
SRP9P49458 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.16■□□□□ 0.5
SRP9P49458 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.16■□□□□ 0.5
SRP9P49458 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SRP9P49458 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP9P49458 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SRP9P49458 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.15■□□□□ 0.5
SRP9P49458 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.15■□□□□ 0.5
SRP9P49458 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.15■□□□□ 0.5
SRP9P49458 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 AC097381.1-201ENST00000429019 1296 ntBASIC18.15■□□□□ 0.5
SRP9P49458 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 MIR6821-201ENST00000617625 74 ntBASIC18.15■□□□□ 0.5
SRP9P49458 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP9P49458 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP9P49458 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.14■□□□□ 0.5
SRP9P49458 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
SRP9P49458 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SRP9P49458 AP006587.3-201ENST00000525742 1516 ntBASIC18.14■□□□□ 0.49
SRP9P49458 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRP9P49458 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SRP9P49458 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SRP9P49458 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.14■□□□□ 0.49
SRP9P49458 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SRP9P49458 RARRES2P6-201ENST00000567333 442 ntBASIC18.14■□□□□ 0.49
SRP9P49458 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.14■□□□□ 0.49
SRP9P49458 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SRP9P49458 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP9P49458 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
SRP9P49458 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SRP9P49458 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms