Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.4■□□□□ 0.54
TGM4P49221 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TGM4P49221 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.4■□□□□ 0.54
TGM4P49221 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.4■□□□□ 0.54
TGM4P49221 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TGM4P49221 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TGM4P49221 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TGM4P49221 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TGM4P49221 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TGM4P49221 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.39■□□□□ 0.53
TGM4P49221 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
TGM4P49221 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.39■□□□□ 0.53
TGM4P49221 AC133561.4-201ENST00000566112 224 ntBASIC18.39■□□□□ 0.53
TGM4P49221 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TGM4P49221 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TGM4P49221 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TGM4P49221 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 MIR4767-201ENST00000582827 78 ntBASIC18.38■□□□□ 0.53
TGM4P49221 SMUG1P1-201ENST00000590640 811 ntBASIC18.38■□□□□ 0.53
TGM4P49221 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TGM4P49221 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.38■□□□□ 0.53
TGM4P49221 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TGM4P49221 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.37■□□□□ 0.53
TGM4P49221 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TGM4P49221 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TGM4P49221 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TGM4P49221 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.37■□□□□ 0.53
TGM4P49221 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.37■□□□□ 0.53
TGM4P49221 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.37■□□□□ 0.53
TGM4P49221 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.37■□□□□ 0.53
TGM4P49221 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.37■□□□□ 0.53
TGM4P49221 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.37■□□□□ 0.53
TGM4P49221 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TGM4P49221 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TGM4P49221 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.37■□□□□ 0.53
TGM4P49221 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.37■□□□□ 0.53
TGM4P49221 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TGM4P49221 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TGM4P49221 SMG8-203ENST00000578922 2178 ntBASIC18.37■□□□□ 0.53
TGM4P49221 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TGM4P49221 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TGM4P49221 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 EDA-201ENST00000338901 1233 ntBASIC18.36■□□□□ 0.53
TGM4P49221 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.36■□□□□ 0.53
TGM4P49221 AC099778.1-201ENST00000568593 1911 ntBASIC18.36■□□□□ 0.53
TGM4P49221 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.36■□□□□ 0.53
TGM4P49221 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.36■□□□□ 0.53
TGM4P49221 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TGM4P49221 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TGM4P49221 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TGM4P49221 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGM4P49221 AC116562.4-201ENST00000641316 2276 ntBASIC18.35■□□□□ 0.53
TGM4P49221 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGM4P49221 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TGM4P49221 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.35■□□□□ 0.53
TGM4P49221 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TGM4P49221 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms