Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BRCC3P46736 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.97■■□□□ 1.11
BRCC3P46736 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BRCC3P46736 AC066615.1-201ENST00000640911 628 ntBASIC21.97■■□□□ 1.11
BRCC3P46736 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BRCC3P46736 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRCC3P46736 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
BRCC3P46736 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
BRCC3P46736 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.97■■□□□ 1.11
BRCC3P46736 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BRCC3P46736 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BRCC3P46736 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.96■■□□□ 1.11
BRCC3P46736 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.96■■□□□ 1.11
BRCC3P46736 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BRCC3P46736 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.96■■□□□ 1.11
BRCC3P46736 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRCC3P46736 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BRCC3P46736 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.96■■□□□ 1.11
BRCC3P46736 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.96■■□□□ 1.11
BRCC3P46736 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRCC3P46736 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
BRCC3P46736 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.95■■□□□ 1.11
BRCC3P46736 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
BRCC3P46736 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.95■■□□□ 1.1
BRCC3P46736 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRCC3P46736 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.95■■□□□ 1.1
BRCC3P46736 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.95■■□□□ 1.1
BRCC3P46736 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BRCC3P46736 AC060766.5-201ENST00000590539 871 ntBASIC21.95■■□□□ 1.1
BRCC3P46736 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
BRCC3P46736 AC006058.3-201ENST00000606217 1069 ntBASIC21.95■■□□□ 1.1
BRCC3P46736 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.95■■□□□ 1.1
BRCC3P46736 HLA-B-256ENST00000639848 1089 ntBASIC21.95■■□□□ 1.1
BRCC3P46736 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.95■■□□□ 1.1
BRCC3P46736 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRCC3P46736 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.95■■□□□ 1.1
BRCC3P46736 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.95■■□□□ 1.1
BRCC3P46736 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRCC3P46736 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BRCC3P46736 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.94■■□□□ 1.1
BRCC3P46736 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.94■■□□□ 1.1
BRCC3P46736 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.94■■□□□ 1.1
BRCC3P46736 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.94■■□□□ 1.1
BRCC3P46736 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 AC087633.2-202ENST00000565166 1439 ntBASIC21.94■■□□□ 1.1
BRCC3P46736 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BRCC3P46736 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
BRCC3P46736 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.93■■□□□ 1.1
BRCC3P46736 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.93■■□□□ 1.1
BRCC3P46736 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
BRCC3P46736 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 AC026366.1-201ENST00000488803 879 ntBASIC21.93■■□□□ 1.1
BRCC3P46736 AP003097.1-201ENST00000530657 1135 ntBASIC21.93■■□□□ 1.1
BRCC3P46736 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRCC3P46736 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.93■■□□□ 1.1
BRCC3P46736 AL024507.2-201ENST00000606070 2574 ntBASIC21.93■■□□□ 1.1
BRCC3P46736 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.93■■□□□ 1.1
BRCC3P46736 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BRCC3P46736 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.92■■□□□ 1.1
BRCC3P46736 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.92■■□□□ 1.1
BRCC3P46736 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
BRCC3P46736 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 AC128676.1-201ENST00000454392 318 ntBASIC21.92■■□□□ 1.1
BRCC3P46736 AC098590.1-201ENST00000468126 897 ntBASIC21.92■■□□□ 1.1
BRCC3P46736 AC008403.3-201ENST00000598924 454 ntBASIC21.92■■□□□ 1.1
BRCC3P46736 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BRCC3P46736 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRCC3P46736 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRCC3P46736 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
BRCC3P46736 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.91■■□□□ 1.1
BRCC3P46736 PNMA6B-201ENST00000538162 1200 ntBASIC21.91■■□□□ 1.1
BRCC3P46736 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.91■■□□□ 1.1
BRCC3P46736 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRCC3P46736 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRCC3P46736 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms