Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX2-1P43699 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-1P43699 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NKX2-1P43699 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NKX2-1P43699 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NKX2-1P43699 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-1P43699 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NKX2-1P43699 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 AL020996.1-203ENST00000536896 2307 ntBASIC16.79■□□□□ 0.28
NKX2-1P43699 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX2-1P43699 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NKX2-1P43699 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NKX2-1P43699 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 AC092171.4-201ENST00000609130 632 ntBASIC16.79■□□□□ 0.28
NKX2-1P43699 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-1P43699 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-1P43699 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NKX2-1P43699 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX2-1P43699 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.78■□□□□ 0.28
NKX2-1P43699 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.78■□□□□ 0.28
NKX2-1P43699 AP005435.1-201ENST00000529293 1178 ntBASIC16.78■□□□□ 0.28
NKX2-1P43699 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-1P43699 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-1P43699 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-1P43699 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-1P43699 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-1P43699 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-1P43699 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NKX2-1P43699 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX2-1P43699 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
NKX2-1P43699 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-1P43699 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.77■□□□□ 0.28
NKX2-1P43699 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-1P43699 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
NKX2-1P43699 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-1P43699 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-1P43699 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-1P43699 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX2-1P43699 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-1P43699 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 AC018445.3-201ENST00000624177 1945 ntBASIC16.76■□□□□ 0.27
NKX2-1P43699 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-1P43699 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX2-1P43699 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX2-1P43699 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX2-1P43699 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX2-1P43699 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms