Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
GRIA3P42263 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.2■□□□□ 0.82
GRIA3P42263 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.2■□□□□ 0.82
GRIA3P42263 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.2■□□□□ 0.82
GRIA3P42263 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 BID-214ENST00000617586 542 ntTSL 5 BASIC20.2■□□□□ 0.82
GRIA3P42263 MYCNOS-205ENST00000641950 531 ntBASIC20.2■□□□□ 0.82
GRIA3P42263 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
GRIA3P42263 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.2■□□□□ 0.82
GRIA3P42263 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GRIA3P42263 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 FEM1AP1-201ENST00000431297 1995 ntBASIC20.19■□□□□ 0.82
GRIA3P42263 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
GRIA3P42263 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
GRIA3P42263 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.19■□□□□ 0.82
GRIA3P42263 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.19■□□□□ 0.82
GRIA3P42263 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
GRIA3P42263 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.19■□□□□ 0.82
GRIA3P42263 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 AC080038.1-201ENST00000611274 1154 ntBASIC20.19■□□□□ 0.82
GRIA3P42263 AC120498.10-201ENST00000621827 505 ntBASIC20.19■□□□□ 0.82
GRIA3P42263 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
GRIA3P42263 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.19■□□□□ 0.82
GRIA3P42263 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
GRIA3P42263 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
GRIA3P42263 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.19■□□□□ 0.82
GRIA3P42263 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GRIA3P42263 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
GRIA3P42263 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
GRIA3P42263 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GRIA3P42263 SLC7A5P1-201ENST00000568957 537 ntBASIC20.18■□□□□ 0.82
GRIA3P42263 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.18■□□□□ 0.82
GRIA3P42263 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GRIA3P42263 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GRIA3P42263 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
GRIA3P42263 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GRIA3P42263 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GRIA3P42263 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
GRIA3P42263 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.17■□□□□ 0.82
GRIA3P42263 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GRIA3P42263 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.17■□□□□ 0.82
GRIA3P42263 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 MFSD11-216ENST00000590393 1141 ntBASIC20.17■□□□□ 0.82
GRIA3P42263 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.17■□□□□ 0.82
GRIA3P42263 RARRES2P11-201ENST00000635158 484 ntBASIC20.17■□□□□ 0.82
GRIA3P42263 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GRIA3P42263 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 KRT16P2-201ENST00000414673 1423 ntBASIC20.17■□□□□ 0.82
GRIA3P42263 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GRIA3P42263 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
GRIA3P42263 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GRIA3P42263 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GRIA3P42263 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms