Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 PGA1YNL158W 597 nt3.71□□□□□ -1.82
RPN3P40016 YOL019W-AYOL019W-A 153 nt3.71□□□□□ -1.82
RPN3P40016 RED1YLR263W 2484 nt3.71□□□□□ -1.82
RPN3P40016 GLC3YEL011W 2115 nt3.71□□□□□ -1.82
RPN3P40016 RPA135YPR010C 3612 nt3.71□□□□□ -1.82
RPN3P40016 RSF2YJR127C 4143 nt3.71□□□□□ -1.82
RPN3P40016 OSH6YKR003W 1347 nt3.7□□□□□ -1.82
RPN3P40016 SMT3YDR510W 306 nt3.7□□□□□ -1.82
RPN3P40016 IRC4YDR540C 540 nt3.7□□□□□ -1.82
RPN3P40016 YER066C-AYER066C-A 501 nt3.7□□□□□ -1.82
RPN3P40016 AIM11YER093C-A 414 nt3.7□□□□□ -1.82
RPN3P40016 YGL007C-AYGL007C-A 87 nt3.7□□□□□ -1.82
RPN3P40016 YJR023CYJR023C 402 nt3.7□□□□□ -1.82
RPN3P40016 YPL152W-AYPL152W-A 99 nt3.7□□□□□ -1.82
RPN3P40016 SNX41YDR425W 1878 nt3.7□□□□□ -1.82
RPN3P40016 URA2YJL130C 6645 nt3.7□□□□□ -1.82
RPN3P40016 MES1YGR264C 2256 nt3.7□□□□□ -1.82
RPN3P40016 MNL1YHR204W 2391 nt3.69□□□□□ -1.82
RPN3P40016 TRS120YDR407C 3870 nt3.69□□□□□ -1.82
RPN3P40016 HMF1YER057C 390 nt3.69□□□□□ -1.82
RPN3P40016 BCD1YHR040W 1101 nt3.69□□□□□ -1.82
RPN3P40016 LSM8YJR022W 330 nt3.69□□□□□ -1.82
RPN3P40016 YKL111CYKL111C 336 nt3.69□□□□□ -1.82
RPN3P40016 YMR122W-AYMR122W-A 255 nt3.69□□□□□ -1.82
RPN3P40016 RPL23AYBL087C 414 nt3.69□□□□□ -1.82
RPN3P40016 RPB11YOL005C 363 nt3.69□□□□□ -1.82
RPN3P40016 EGD1YPL037C 474 nt3.69□□□□□ -1.82
RPN3P40016 YPL238CYPL238C 390 nt3.69□□□□□ -1.82
RPN3P40016 MSR1YHR091C 1932 nt3.69□□□□□ -1.82
RPN3P40016 OSH3YHR073W 2991 nt3.69□□□□□ -1.82
RPN3P40016 XRN1YGL173C 4587 nt3.68□□□□□ -1.82
RPN3P40016 ATG21YPL100W 1491 nt3.68□□□□□ -1.82
RPN3P40016 DPB11YJL090C 2295 nt3.68□□□□□ -1.82
RPN3P40016 YSW1YBR148W 1830 nt3.68□□□□□ -1.82
RPN3P40016 FRQ1YDR373W 573 nt3.68□□□□□ -1.82
RPN3P40016 RMT2YDR465C 1239 nt3.68□□□□□ -1.82
RPN3P40016 YER188C-AYER188C-A 300 nt3.68□□□□□ -1.82
RPN3P40016 YJL015CYJL015C 285 nt3.68□□□□□ -1.82
RPN3P40016 YJR140W-AYJR140W-A 150 nt3.68□□□□□ -1.82
RPN3P40016 FCF2YLR051C 654 nt3.68□□□□□ -1.82
RPN3P40016 JJJ2YJL162C 1752 nt3.68□□□□□ -1.82
RPN3P40016 DAN4YJR151C 3486 nt3.68□□□□□ -1.82
RPN3P40016 SLP1YOR154W 1764 nt3.67□□□□□ -1.82
RPN3P40016 YDR183C-AYDR183C-A 258 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)DtK(UUU)D 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)G1tK(UUU)G1 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)G2tK(UUU)G2 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)KtK(UUU)K 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)LtK(UUU)L 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)OtK(UUU)O 73 nt3.67□□□□□ -1.82
RPN3P40016 tK(UUU)PtK(UUU)P 73 nt3.67□□□□□ -1.82
RPN3P40016 YKL033W-AYKL033W-A 711 nt3.67□□□□□ -1.82
RPN3P40016 YPR108W-AYPR108W-A 213 nt3.67□□□□□ -1.82
RPN3P40016 MUS81YDR386W 1899 nt3.67□□□□□ -1.82
RPN3P40016 IOC2YLR095C 2439 nt3.66□□□□□ -1.82
RPN3P40016 SPA2YLL021W 4401 nt3.66□□□□□ -1.82
RPN3P40016 ATP22YDR350C 2055 nt3.66□□□□□ -1.82
RPN3P40016 LCB5YLR260W 2064 nt3.66□□□□□ -1.82
RPN3P40016 PAU10YDR542W 363 nt3.66□□□□□ -1.82
RPN3P40016 PAU11YGL261C 363 nt3.66□□□□□ -1.82
RPN3P40016 PAU4YLR461W 363 nt3.66□□□□□ -1.82
RPN3P40016 PRE8YML092C 753 nt3.66□□□□□ -1.82
RPN3P40016 YNL198CYNL198C 303 nt3.66□□□□□ -1.82
RPN3P40016 SEC6YIL068C 2418 nt3.66□□□□□ -1.82
RPN3P40016 YBP1YBR216C 2025 nt3.66□□□□□ -1.82
RPN3P40016 KRE5YOR336W 4098 nt3.66□□□□□ -1.82
RPN3P40016 NUP60YAR002W 1620 nt3.66□□□□□ -1.82
RPN3P40016 SLM2YNL047C 1971 nt3.65□□□□□ -1.82
RPN3P40016 NOT5YPR072W 1683 nt3.65□□□□□ -1.82
RPN3P40016 MDM32YOR147W 1869 nt3.65□□□□□ -1.82
RPN3P40016 ABP140YOR239W 1887 nt3.65□□□□□ -1.82
RPN3P40016 YDR193WYDR193W 399 nt3.65□□□□□ -1.83
RPN3P40016 YER107W-AYER107W-A 321 nt3.65□□□□□ -1.83
RPN3P40016 URM1YIL008W 300 nt3.65□□□□□ -1.83
RPN3P40016 PAU14YIL176C 363 nt3.65□□□□□ -1.83
RPN3P40016 PAU1YJL223C 363 nt3.65□□□□□ -1.83
RPN3P40016 LDS2YOL047C 1071 nt3.65□□□□□ -1.83
RPN3P40016 IRC23YOR044W 474 nt3.65□□□□□ -1.83
RPN3P40016 FAS1YKL182W 6156 nt3.65□□□□□ -1.83
RPN3P40016 BAR1YIL015W 1764 nt3.64□□□□□ -1.83
RPN3P40016 CYC7YEL039C 342 nt3.64□□□□□ -1.83
RPN3P40016 YFL063WYFL063W 456 nt3.64□□□□□ -1.83
RPN3P40016 BAT1YHR208W 1182 nt3.64□□□□□ -1.83
RPN3P40016 SRL3YKR091W 741 nt3.64□□□□□ -1.83
RPN3P40016 HHF1YBR009C 312 nt3.64□□□□□ -1.83
RPN3P40016 HEM4YOR278W 828 nt3.64□□□□□ -1.83
RPN3P40016 MCD4YKL165C 2760 nt3.63□□□□□ -1.83
RPN3P40016 APL4YPR029C 2499 nt3.63□□□□□ -1.83
RPN3P40016 snR80snR80 171 nt3.63□□□□□ -1.83
RPN3P40016 YDL176WYDL176W 2127 nt3.63□□□□□ -1.83
RPN3P40016 FMP10YER182W 735 nt3.63□□□□□ -1.83
RPN3P40016 YFR056CYFR056C 369 nt3.63□□□□□ -1.83
RPN3P40016 BLI1YKL061W 342 nt3.63□□□□□ -1.83
RPN3P40016 SNF12YNR023W 1701 nt3.62□□□□□ -1.83
RPN3P40016 DNM1YLL001W 2274 nt3.62□□□□□ -1.83
RPN3P40016 TIF35YDR429C 825 nt3.62□□□□□ -1.83
RPN3P40016 YPL229WYPL229W 621 nt3.62□□□□□ -1.83
RPN3P40016 NUP159YIL115C 4383 nt3.62□□□□□ -1.83
RPN3P40016 LYS9YNR050C 1341 nt3.62□□□□□ -1.83
RPN3P40016 STE6YKL209C 3873 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 66.8 ms